Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0243500 Rhododendron simsii HOM05D031363 ORTHO05D037310 1.5e-86 322.8 162 100.0
Rhsim04G0243800 Rhododendron simsii HOM05D031363 ORTHO05D013015 7.6e-86 320.5 162 99.4
Rhsim04G0243900 Rhododendron simsii HOM05D031363 ORTHO05D001819 7.7e-22 107.8 158 39.2
Rhsim04G0235800 Rhododendron simsii HOM05D000862 ORTHO05D003588 2.3e-18 96.3 154 39.0
Rhsim04G0238300 Rhododendron simsii HOM05D000862 ORTHO05D003588 2.3e-18 96.3 154 39.0
Rhsim04G0235700 Rhododendron simsii HOM05D000862 ORTHO05D003588 6.8e-18 94.7 147 38.1
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 7.0e-15 84.7 150 34.0
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.2e-14 84.0 146 36.3
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 4.5e-14 82.0 150 33.3
Rhsim04G0238400 Rhododendron simsii HOM05D000862 ORTHO05D003588 7.7e-14 81.3 105 42.9
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 2.5e-12 76.3 119 39.5
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 3.2e-12 75.9 154 33.1
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 4.2e-12 75.5 149 31.5
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 5.5e-12 75.1 132 40.2
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 9.5e-12 74.3 149 32.2
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.1e-11 73.2 161 34.8
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 3.6e-11 72.4 151 35.8
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 3.6e-11 72.4 149 31.5
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 4.7e-11 72.0 149 30.2
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.4e-10 70.5 148 33.8
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 1.8e-10 70.1 150 31.3
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 1.8e-10 70.1 131 32.8
MBI18_g25089_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 3.0e-10 69.3 151 31.1
Peaxi162Scf00109g00034 Petunia axillaris HOM05D000326 ORTHO05D037310 3.0e-10 69.3 108 38.0
Nitab4.5_0000035g0080 Nicotiana tabacum HOM05D003146 ORTHO05D001819 6.8e-10 68.2 127 32.3
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 6.8e-10 68.2 158 32.9
Solyc01g097660.2 Solanum lycopersicum HOM05D011410 ORTHO05D013015 1.2e-09 67.4 160 29.4
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.5e-09 67.0 102 40.2
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 1.5e-09 67.0 139 30.9
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.5e-09 67.0 117 34.2
Sopen01g041270 Solanum pennellii HOM05D011410 ORTHO05D013015 1.5e-09 67.0 160 29.4
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.6e-09 66.2 151 31.1
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 5.7e-09 65.1 146 30.1
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 5.7e-09 65.1 143 30.8
SalBow3G0301 Salvia bowleyana HOM05D011410 ORTHO05D013015 1.7e-08 63.5 147 29.3
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 2.8e-08 62.8 159 30.8
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 2.8e-08 62.8 150 26.0
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 3.7e-08 62.4 112 32.1
Eucgr.L02838 Eucalyptus grandis HOM05D001578 ORTHO05D001207 4.9e-08 62.0 124 27.4
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 4.9e-08 62.0 156 30.1
Peaxi162Scf00126g00017 Petunia axillaris HOM05D003146 ORTHO05D001819 4.9e-08 62.0 143 32.9
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 8.3e-08 61.2 98 36.7
Eucgr.H04068 Eucalyptus grandis HOM05D001578 ORTHO05D001207 8.3e-08 61.2 79 38.0
Eucgr.L02840 Eucalyptus grandis HOM05D001578 ORTHO05D001207 8.3e-08 61.2 79 38.0
Solyc03g112170.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 8.3e-08 61.2 148 28.4
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 1.1e-07 60.8 140 28.6
Sabra08G0077500 Salix brachista HOM05D001578 ORTHO05D001207 1.1e-07 60.8 150 28.7
CAN.G111.35 Capsicum annuum HOM05D011410 ORTHO05D013015 1.4e-07 60.5 160 30.6
Sopen03g031260 Solanum pennellii HOM05D003146 ORTHO05D001819 1.4e-07 60.5 148 28.4
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 1.8e-07 60.1 70 44.3
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.8e-07 60.1 160 27.5
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 1.8e-07 60.1 148 28.4
Lsat_1_v5_gn_6_117520 Lactuca sativa HOM05D058011 ORTHO05D001819 2.4e-07 59.7 149 27.5
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 2.4e-07 59.7 123 31.7
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 3.1e-07 59.3 139 29.5
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.1e-07 59.3 139 29.5
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 4.1e-07 58.9 132 29.5
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 5.4e-07 58.5 76 40.8
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 5.4e-07 58.5 150 28.0
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 7.0e-07 58.2 82 35.4
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 7.0e-07 58.2 74 40.5
Dinv02021 Davidia involucrata HOM05D010983 ORTHO05D005996 7.0e-07 58.2 60 46.7
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 7.0e-07 58.2 78 42.3
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 7.0e-07 58.2 160 30.6
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 7.0e-07 58.2 101 32.7
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 9.2e-07 57.8 159 26.4
Rhsim13G0002900 Rhododendron simsii HOM05D001578 ORTHO05D001207 9.2e-07 57.8 88 35.2
Manes.02G182200 Manihot esculenta HOM05D004894 ORTHO05D009560 1.6e-06 57.0 140 26.4
PGR004G1767 Punica granatum HOM05D001578 ORTHO05D001207 1.6e-06 57.0 86 33.7
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.0e-06 56.6 120 29.2
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.0e-06 56.6 120 29.2
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 2.0e-06 56.6 147 25.9
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 2.0e-06 56.6 132 28.8
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 2.0e-06 56.6 86 36.0
PGSC0003DMG400011190 Solanum tuberosum HOM05D039580 ORTHO05D001819 2.0e-06 56.6 106 29.2
TPR.G25409 Trifolium pratense HOM05D001578 ORTHO05D001207 2.0e-06 56.6 149 21.5
Haze_04447 Corylus avellana HOM05D001578 ORTHO05D001207 2.7e-06 56.2 87 32.2
FAN02G2223 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.7e-06 56.2 74 41.9
Actinidia21379 Actinidia chinensis HOM05D001578 ORTHO05D001207 3.5e-06 55.8 98 33.7
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 3.5e-06 55.8 150 32.7
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 3.5e-06 55.8 145 29.0
MBI19_g19942_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 3.5e-06 55.8 113 31.9
MD03G1249700 Malus domestica HOM05D001578 ORTHO05D001207 4.5e-06 55.5 147 26.5
Medtr4g122750 Medicago truncatula HOM05D001578 ORTHO05D001207 4.5e-06 55.5 147 28.6
Rhsim04G0243700 Rhododendron simsii HOM05D031363 ORTHO05D037310 4.5e-06 55.5 68 41.2
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 5.9e-06 55.1 138 31.2
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 5.9e-06 55.1 138 31.2
MBI19_g08236_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D010044 5.9e-06 55.1 86 38.4
MBI19_g19941_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 5.9e-06 55.1 113 31.9
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 5.9e-06 55.1 55 45.5
PSO675G2139 Papaver somniferum HOM05D028959 ORTHO05D030431 5.9e-06 55.1 151 27.8
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 7.7e-06 54.7 127 29.1
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 7.7e-06 54.7 93 33.3
Medtr4g122720 Medicago truncatula HOM05D001578 ORTHO05D001207 7.7e-06 54.7 96 28.1
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 7.7e-06 54.7 76 36.8


User provided reference genes

Program Settings