Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0241600 Rhododendron simsii HOM05D008159 ORTHO05D009498 5.0e-45 184.1 96 100.0
vmacro07951 Vaccinium macrocarpon HOM05D008159 ORTHO05D009498 1.0e-37 159.8 91 86.8
Cc03_g00570 Coffea canephora HOM05D008159 ORTHO05D009498 9.2e-15 83.6 93 49.5
RcHm_v2.0_Chr4g0425921 Rosa chinensis HOM05D008159 ORTHO05D009498 1.1e-12 76.6 96 49.0
Manes.15G002400 Manihot esculenta HOM05D008159 ORTHO05D009498 1.5e-12 76.3 91 52.7
FAN07G1405 Fragaria x ananassa HOM05D008159 ORTHO05D009498 5.6e-12 74.3 96 47.9
FvH4_4g20450 Fragaria vesca HOM05D008159 ORTHO05D009498 7.3e-12 73.9 96 47.9
FAN12G1128 Fragaria x ananassa HOM05D008159 ORTHO05D009498 7.3e-12 73.9 96 47.9
Thecc.04G305200 Theobroma cacao HOM05D008159 ORTHO05D009498 2.8e-11 72.0 92 54.3
CSS0042580 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D009565 2.4e-10 68.9 82 47.6
Potri.008G102400 Populus trichocarpa HOM05D008159 ORTHO05D009498 2.4e-10 68.9 63 57.1
Ciclev10006357m.g Citrus clementina HOM05D008159 ORTHO05D009498 3.1e-10 68.6 91 44.0
CiPaw.01G135400 Carya illinoinensis HOM05D008159 ORTHO05D009498 2.0e-09 65.9 92 43.5
Glyma.15G138300 Glycine max HOM05D008159 ORTHO05D009498 2.0e-09 65.9 91 37.4
MD13G1149600 Malus domestica HOM05D008159 ORTHO05D009498 9.9e-09 63.5 95 45.3
Eucgr.B03969 Eucalyptus grandis HOM05D008159 ORTHO05D009498 1.7e-08 62.8 93 43.0
Duzib052G0731 Durio zibethinus HOM05D008159 ORTHO05D009498 2.9e-08 62.0 89 44.9
Potri.010G148300 Populus trichocarpa HOM05D008159 ORTHO05D009498 2.9e-08 62.0 91 41.8
DCAR_005440 Daucus carota HOM05D008159 ORTHO05D009498 6.4e-08 60.8 81 43.2
THA.LOC109116907 Tarenaya hassleriana HOM05D008159 ORTHO05D009498 6.4e-08 60.8 92 44.6
Cc02_g35240 Coffea canephora HOM05D008159 ORTHO05D009498 1.1e-07 60.1 92 42.4
EL10Ac3g05544 Beta vulgaris HOM05D008159 ORTHO05D009498 1.9e-07 59.3 94 39.4
CiPaw.07G030900 Carya illinoinensis HOM05D008159 ORTHO05D009498 2.4e-07 58.9 102 37.3
Lalb_Chr21g0310201 Lupinus albus HOM05D008159 ORTHO05D009498 2.4e-07 58.9 67 46.3
Oeu053734.1 Olea europaea HOM05D008159 ORTHO05D009498 3.2e-07 58.5 104 36.5
CARHR287950 Cardamine hirsuta HOM05D008159 ORTHO05D009498 4.2e-07 58.2 65 44.6
TAR365G1059 Trochodendron aralioides HOM05D001895 ORTHO05D002082 4.2e-07 58.2 98 45.9
Migut.G00043 Erythranthe guttata HOM05D065555 ORTHO05D009498 5.4e-07 57.8 70 44.3
PGSC0003DMG402002794 Solanum tuberosum HOM05D008159 ORTHO05D009498 5.4e-07 57.8 112 36.6
A06p38300 Brassica napus HOM05D008159 ORTHO05D009498 7.1e-07 57.4 93 39.8
BraA06t26745Z Brassica rapa HOM05D008159 ORTHO05D009498 7.1e-07 57.4 93 39.8
Prupe.1G113600 Prunus persica HOM05D008159 ORTHO05D009498 7.1e-07 57.4 68 51.5
Phvul.007G202400 Phaseolus vulgaris HOM05D008159 ORTHO05D009498 9.3e-07 57.0 67 43.3
Sp2g19830 Schrenkiella parvula HOM05D008159 ORTHO05D009498 9.3e-07 57.0 93 38.7
SpUn0021_0020 Schrenkiella parvula HOM05D008159 ORTHO05D009498 9.3e-07 57.0 93 38.7
AT5G49525 Arabidopsis thaliana HOM05D008159 ORTHO05D009498 1.2e-06 56.6 61 44.3
C07p39940 Brassica napus HOM05D008159 ORTHO05D009498 1.2e-06 56.6 63 44.4
BolC7t44526H Brassica oleracea HOM05D008159 ORTHO05D009498 1.2e-06 56.6 63 44.4
Migut.B00941 Erythranthe guttata HOM05D008159 ORTHO05D009498 1.2e-06 56.6 87 42.5
Thhalv10005580m.g Eutrema salsugineum HOM05D008159 ORTHO05D009498 1.2e-06 56.6 92 38.0
Eucgr.H03298 Eucalyptus grandis HOM05D008159 ORTHO05D009498 2.7e-06 55.5 105 39.0
Eucgr.H04070 Eucalyptus grandis HOM05D008159 ORTHO05D009498 2.7e-06 55.5 95 42.1
Lalb_Chr06g0167441 Lupinus albus HOM05D008159 ORTHO05D009498 2.7e-06 55.5 67 41.8
MD16G1149900 Malus domestica HOM05D008159 ORTHO05D009498 2.7e-06 55.5 90 44.4
Manes.09G177901 Manihot esculenta HOM05D008159 ORTHO05D009498 4.6e-06 54.7 106 36.8
Aa31LG11G9850 Aethionema arabicum HOM05D009594 ORTHO05D009498 6.0e-06 54.3 58 48.3
MBI18_g27372_MAGBIO Magnolia biondii HOM05D008159 ORTHO05D009498 6.0e-06 54.3 77 40.3


User provided reference genes

Program Settings