Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0241200 Rhododendron simsii HOM05D001578 ORTHO05D001207 8.6e-91 337.0 179 100.0
Actinidia13347 Actinidia chinensis HOM05D001578 ORTHO05D001207 6.8e-19 98.2 151 42.4
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 1.3e-17 94.0 166 38.0
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 8.0e-12 74.7 138 36.2
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.5e-10 70.5 141 32.6
Sabra10G0043600 Salix brachista HOM05D001578 ORTHO05D001207 2.0e-10 70.1 126 33.3
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 2.6e-10 69.7 159 30.2
Cc03_g00600 Coffea canephora HOM05D001578 ORTHO05D001207 4.4e-10 68.9 154 31.2
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 4.4e-10 68.9 164 28.0
FvH4_4g20440 Fragaria vesca HOM05D001578 ORTHO05D001207 1.3e-09 67.4 161 31.1
FAN12G2021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.3e-09 67.4 161 31.1
Potri.010G063000 Populus trichocarpa HOM05D001578 ORTHO05D001207 1.3e-09 67.4 116 32.8
MD03G1250000 Malus domestica HOM05D001578 ORTHO05D001207 2.2e-09 66.6 123 33.3
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 2.2e-09 66.6 143 36.4
MD03G1248700 Malus domestica HOM05D001578 ORTHO05D001207 2.8e-09 66.2 123 35.8
Lsat_1_v5_gn_6_301 Lactuca sativa HOM05D001578 ORTHO05D001207 3.7e-09 65.9 129 31.0
MD03G1249700 Malus domestica HOM05D001578 ORTHO05D001207 3.7e-09 65.9 123 34.1
TWI53G0804 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 3.7e-09 65.9 138 30.4
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 4.9e-09 65.5 178 29.2
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 4.9e-09 65.5 178 29.2
FAN07G2152 Fragaria x ananassa HOM05D001578 ORTHO05D001207 6.3e-09 65.1 172 30.8
DCAR_023358 Daucus carota HOM05D001578 ORTHO05D001207 1.1e-08 64.3 133 33.1
Lj3P834T43 Lonicera japonica HOM05D001578 ORTHO05D001207 1.4e-08 63.9 158 27.2
MD03G1249600 Malus domestica HOM05D001578 ORTHO05D001207 1.4e-08 63.9 123 33.3
Actinidia18465 Actinidia chinensis HOM05D001578 ORTHO05D001207 7.0e-08 61.6 143 31.5
A06p04790 Brassica napus HOM05D001578 ORTHO05D001207 7.0e-08 61.6 129 24.0
BraA06t23683Z Brassica rapa HOM05D001578 ORTHO05D001207 7.0e-08 61.6 129 24.0
Duzib052G0195 Durio zibethinus HOM05D001578 ORTHO05D001207 7.0e-08 61.6 156 28.8
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 7.0e-08 61.6 154 24.7
CiPaw.01G135900 Carya illinoinensis HOM05D001578 ORTHO05D001207 9.1e-08 61.2 145 29.7
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 9.1e-08 61.2 114 29.8
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 9.1e-08 61.2 143 30.8
Actinidia18466 Actinidia chinensis HOM05D001578 ORTHO05D001207 2.0e-07 60.1 117 33.3
Gorai.011G202200 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.0e-07 60.1 112 31.2
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 2.7e-07 59.7 156 28.8
Gohir.A10G174100 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.7e-07 59.7 112 30.4
Gohir.D10G180700 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.7e-07 59.7 112 31.2
THA.LOC104820316 Tarenaya hassleriana HOM05D001578 ORTHO05D001207 3.5e-07 59.3 133 27.8
Atru.chr4.3056 Acer truncatum HOM05D001578 ORTHO05D001207 5.9e-07 58.5 139 30.2
BolC6t35358H Brassica oleracea HOM05D001578 ORTHO05D001207 5.9e-07 58.5 115 26.1
Manes.02G201700 Manihot esculenta HOM05D001578 ORTHO05D001207 5.9e-07 58.5 156 28.2
BcaB07g33804 Brassica carinata HOM05D001578 ORTHO05D001207 7.7e-07 58.2 115 26.1
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 7.7e-07 58.2 144 29.2
CiPaw.01G135600 Carya illinoinensis HOM05D001578 ORTHO05D001207 1.0e-06 57.8 113 31.9
Migut.M01936 Erythranthe guttata HOM05D001578 ORTHO05D001207 1.0e-06 57.8 172 26.7
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 1.0e-06 57.8 133 31.6
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.0e-06 57.8 133 31.6
BcaC08g42990 Brassica carinata HOM05D001578 ORTHO05D001207 1.3e-06 57.4 129 24.0
C06p02320 Brassica napus HOM05D001578 ORTHO05D001207 1.3e-06 57.4 129 24.0
Lj4g0009388 Lotus japonicus HOM05D001578 ORTHO05D001207 1.3e-06 57.4 117 29.9
MSTRG.16314 Avicennia marina HOM05D001578 ORTHO05D001207 1.7e-06 57.0 135 32.6
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 1.7e-06 57.0 127 25.2
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.7e-06 57.0 133 31.6
Gorai.009G290600 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.7e-06 57.0 115 30.4
Nitab4.5_0000651g0280 Nicotiana tabacum HOM05D001578 ORTHO05D001207 2.3e-06 56.6 171 24.6
MD13G1149700 Malus domestica HOM05D001578 ORTHO05D001207 2.9e-06 56.2 187 28.3
CARHR088530 Cardamine hirsuta HOM05D001578 ORTHO05D001207 3.8e-06 55.8 112 31.2
Nitab4.5_0002150g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 5.0e-06 55.5 114 33.3
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 5.0e-06 55.5 119 31.9
Atru.chr4.3057 Acer truncatum HOM05D001578 ORTHO05D001207 6.6e-06 55.1 171 27.5
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 6.6e-06 55.1 129 28.7
CARHR037570 Cardamine hirsuta HOM05D001578 ORTHO05D001207 8.6e-06 54.7 89 29.2
Gohir.A05G275500 Gossypium hirsutum HOM05D001578 ORTHO05D001207 8.6e-06 54.7 157 28.7
Lalb_Chr20g0117771 Lupinus albus HOM05D001578 ORTHO05D001207 8.6e-06 54.7 131 30.5


User provided reference genes

Program Settings