Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 5.9e-132 474.2 233 100.0
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 7.3e-106 387.5 216 84.7
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 4.9e-86 321.6 222 68.9
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.4e-85 318.2 208 73.6
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 2.3e-83 312.8 218 67.4
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 3.1e-80 302.4 218 65.1
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 5.2e-80 301.6 208 68.8
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 6.8e-80 301.2 209 66.0
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.5e-79 300.1 209 66.0
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.0e-79 299.7 208 65.4
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.4e-79 298.9 217 64.1
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.4e-79 298.5 209 65.6
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 5.8e-79 298.1 226 61.9
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 5.8e-79 298.1 228 61.8
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.3e-78 297.0 222 63.5
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.7e-78 296.6 227 61.2
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.7e-78 296.6 209 67.9
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 2.2e-78 296.2 223 64.1
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 2.9e-78 295.8 208 63.9
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 6.4e-78 294.7 201 69.7
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 8.4e-78 294.3 229 60.7
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 8.4e-78 294.3 219 61.6
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.1e-77 293.9 208 65.4
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.9e-77 293.1 209 64.6
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.9e-77 293.1 222 62.6
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 5.4e-77 291.6 229 60.3
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 7.1e-77 291.2 208 65.9
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 9.2e-77 290.8 223 61.9
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 1.2e-76 290.4 225 60.9
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.6e-76 290.0 208 65.9
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.7e-76 289.3 209 65.1
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 2.7e-76 289.3 208 63.9
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 2.7e-76 289.3 208 66.3
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 3.5e-76 288.9 208 64.9
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 3.5e-76 288.9 224 59.8
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 6.0e-76 288.1 224 61.2
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 6.0e-76 288.1 223 61.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 6.0e-76 288.1 214 62.6
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 7.8e-76 287.7 226 63.7
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 7.8e-76 287.7 209 64.6
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.3e-75 287.0 224 58.5
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.7e-75 286.6 228 61.4
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 3.0e-75 285.8 209 64.1
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 3.9e-75 285.4 208 63.5
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 5.1e-75 285.0 220 64.1
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 6.6e-75 284.6 220 60.0
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 3.3e-74 282.3 227 59.5
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 3.3e-74 282.3 211 61.1
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 4.3e-74 282.0 218 61.5
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 7.3e-74 281.2 208 65.4
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.6e-73 280.0 209 62.7
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 2.1e-73 279.6 208 63.0
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 2.1e-73 279.6 211 61.6
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 4.7e-73 278.5 208 63.0
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 6.2e-73 278.1 220 61.8
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 8.1e-73 277.7 228 59.2
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 8.1e-73 277.7 214 60.7
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 8.1e-73 277.7 208 61.5
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.4e-72 276.9 232 59.9
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 3.1e-72 275.8 285 49.5
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 3.1e-72 275.8 210 61.9
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 5.2e-72 275.0 209 62.2
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 6.9e-72 274.6 176 72.7
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 8.9e-72 274.2 209 62.2
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.2e-71 273.9 211 60.2
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 2.0e-71 273.1 215 59.5
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 2.6e-71 272.7 215 59.5
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 5.8e-71 271.6 219 59.8
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 7.6e-71 271.2 208 62.0
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.2e-70 269.6 215 59.1
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 6.4e-70 268.1 228 55.7
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 8.4e-70 267.7 217 57.6
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.9e-69 266.5 215 58.1
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 2.4e-69 266.2 217 59.0
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 3.2e-69 265.8 225 56.4
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 3.2e-69 265.8 209 60.8
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 5.4e-69 265.0 217 58.5
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 5.4e-69 265.0 217 58.5
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 5.4e-69 265.0 217 58.5
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.6e-68 263.5 229 55.0
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.6e-68 263.5 215 59.1
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 4.6e-68 261.9 215 58.1
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.0e-67 260.8 208 57.2
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 3.9e-67 258.8 209 58.9
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.1e-66 257.3 211 55.9
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.6e-65 253.4 208 56.7
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.1e-64 250.8 196 61.7
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 1.8e-64 250.0 207 58.9
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 3.1e-64 249.2 173 67.6
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 3.1e-64 249.2 213 56.3
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 3.4e-63 245.7 217 55.8
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 4.5e-63 245.4 208 53.4
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.3e-62 243.8 207 57.0
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 8.4e-62 241.1 209 55.0
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.2e-61 239.2 173 65.9
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.5e-60 235.7 172 65.1
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.5e-58 229.6 208 53.4
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.3e-57 227.3 243 47.3
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 2.8e-57 226.1 212 54.7
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 6.2e-57 224.9 150 74.0
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.5e-55 220.3 179 60.3
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 7.1e-53 211.5 173 58.4
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 1.0e-51 207.6 208 47.1
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.3e-51 207.2 213 47.4
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.1e-50 204.1 211 47.9
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 8.2e-49 198.0 209 46.4
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.2e-47 194.1 207 45.4
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.0e-47 193.4 207 47.3
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.4e-47 192.6 235 43.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 1.0e-46 191.0 212 44.8
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.3e-46 190.7 208 46.6
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.4e-45 187.2 158 54.4
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 4.2e-45 185.7 155 58.1
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.3e-43 179.9 113 76.1
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 5.7e-42 175.3 175 52.0
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.3e-41 174.1 141 58.2
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.9e-30 136.3 167 43.1
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 6.3e-25 118.6 216 31.9
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 8.2e-25 118.2 79 72.2
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 2.4e-24 116.7 91 61.5
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.0e-19 99.8 222 31.5
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 2.0e-18 97.1 94 50.0
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 3.8e-14 82.8 56 64.3
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.9e-13 80.5 93 49.5
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 3.3e-10 69.7 115 32.2
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 2.2e-09 67.0 79 45.6
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 2.7e-07 60.1 43 58.1


User provided reference genes

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