Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 8.3e-218 760.0 361 100.0
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.5e-208 728.0 362 96.4
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 6.3e-141 504.6 363 70.8
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.7e-125 452.2 233 93.6
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.7e-118 428.3 370 61.1
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 9.8e-118 427.6 371 61.2
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 8.3e-117 424.5 368 59.8
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 7.8e-115 417.9 368 59.0
Rhsim11G0054100 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.3e-106 389.8 338 60.4
TWI12G1353 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 4.2e-20 103.2 199 32.2
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 7.2e-20 102.4 300 27.7
TWI79G1583 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 3.4e-17 93.6 195 33.8
TWI79G0083 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 2.2e-16 90.9 208 31.2
TWI79G0211 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 1.4e-15 88.2 199 31.2
TWI75G0303 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 5.4e-15 86.3 200 31.5
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.2e-14 85.1 342 25.7
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 5.9e-14 82.8 272 27.2
COL.COLO4_29429 Corchorus olitorius HOM05D035412 ORTHO05D019051 1.0e-13 82.0 213 32.4
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.3e-13 81.6 323 25.1
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.9e-13 80.5 240 30.0
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.5e-12 78.2 324 24.1
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 1.9e-12 77.8 206 31.1
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 5.5e-12 76.3 261 28.7
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 7.2e-12 75.9 203 31.5
PGR031G1231 Punica granatum HOM05D023452 ORTHO05D019051 5.2e-10 69.7 254 28.0
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 3.7e-08 63.5 233 27.5
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 3.7e-08 63.5 178 27.5
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.8e-07 61.2 218 26.6
DCAR_022881 Daucus carota HOM05D014492 ORTHO05D015818 2.4e-07 60.8 185 27.0
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.2e-06 58.5 175 30.3


User provided reference genes

Program Settings