Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.2e-247 859.4 441 100.0
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 3.6e-138 495.7 443 64.6
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 2.0e-136 490.0 446 62.1
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.7e-133 479.6 417 63.8
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.2e-122 444.1 435 60.0
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 3.3e-115 419.5 459 58.4
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.0e-108 397.9 446 53.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.0e-108 397.9 452 52.2
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 2.0e-104 383.6 446 51.6
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 1.6e-93 347.4 443 48.1
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 3.5e-93 346.3 427 47.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 3.0e-92 343.2 444 48.2
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.2e-90 337.8 443 47.6
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 2.6e-88 330.1 446 47.8
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 2.9e-87 326.6 448 48.0
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.9e-83 313.9 443 46.0
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 2.5e-83 313.5 444 46.8
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.4e-81 307.8 446 44.2
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 3.8e-79 299.7 357 51.0
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 4.9e-79 299.3 432 44.7
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.9e-78 297.4 447 43.6
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 2.4e-78 297.0 429 46.9
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 2.4e-78 297.0 447 45.9
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 9.3e-78 295.0 435 43.7
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 4.3e-75 286.2 430 45.6
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 2.8e-74 283.5 452 41.2
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 1.1e-73 281.6 444 43.9
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.4e-73 281.2 453 42.2
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 9.0e-73 278.5 442 42.3
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 6.4e-71 272.3 445 42.7
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 3.2e-70 270.0 442 43.0
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 1.0e-68 265.0 452 41.4
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.3e-68 264.6 447 42.3
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.8e-68 264.2 447 42.3
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 1.1e-67 261.5 516 38.2
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.5e-67 260.4 447 42.1
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 9.6e-67 258.5 446 38.3
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.3e-66 258.1 483 39.5
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.8e-65 254.2 455 39.8
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 4.0e-65 253.1 440 40.0
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 9.0e-65 251.9 351 46.4
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.2e-64 251.5 431 41.1
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 1.2e-64 251.5 440 39.5
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.6e-64 250.4 447 39.8
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.6e-64 248.8 444 40.5
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 2.2e-63 247.3 471 36.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 3.8e-63 246.5 440 40.0
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 8.4e-63 245.4 434 38.5
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.1e-62 245.0 444 39.0
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.1e-62 245.0 310 49.7
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.4e-62 244.6 444 40.1
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 4.6e-61 239.6 430 41.4
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 1.3e-60 238.0 446 37.7
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 5.1e-60 236.1 411 40.4
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 4.3e-59 233.0 349 43.6
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.3e-59 233.0 331 43.8
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.0e-56 224.2 444 37.8
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 5.0e-55 219.5 500 35.0
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.1e-53 214.2 445 38.0
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 5.1e-52 209.5 415 36.4
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 5.1e-52 209.5 445 36.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 6.7e-52 209.1 212 58.5
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.1e-51 208.4 424 36.6
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 5.7e-51 206.1 426 38.0
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 1.1e-49 201.8 402 37.8
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 7.7e-48 195.7 496 34.1
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 6.5e-47 192.6 174 62.1
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.9e-46 191.0 410 37.6
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 5.5e-46 189.5 301 41.2
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.7e-45 187.2 314 41.1
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 6.1e-45 186.0 171 57.9
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 4.3e-43 179.9 210 52.9
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 1.4e-41 174.9 372 34.7
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 2.2e-39 167.5 426 35.2
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 6.5e-39 166.0 275 41.5
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 9.4e-38 162.2 370 35.7
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 3.0e-36 157.1 326 36.8
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.3e-34 149.4 129 60.5
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 8.2e-34 149.1 312 36.5
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.4e-33 148.3 421 32.8
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 7.7e-32 142.5 319 34.5
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.3e-31 141.7 262 38.2
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 2.9e-31 140.6 179 44.1
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.9e-31 140.6 91 75.8
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 3.0e-28 130.6 155 47.7
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 8.5e-23 112.5 476 28.2
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 6.5e-15 86.3 185 33.0
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 1.5e-14 85.1 408 28.4
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 9.4e-14 82.4 175 29.7
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 9.4e-14 82.4 96 41.7
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.2e-10 71.2 148 34.5
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 2.4e-09 67.8 56 66.1
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 1.6e-08 65.1 73 47.9
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 3.8e-07 60.5 221 25.3
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 4.3e-06 57.0 51 56.9


User provided reference genes

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