Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0211200 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.6e-94 349.4 169 100.0
Rhsim04G0210800 Rhododendron simsii HOM05D014702 ORTHO05D013331 3.2e-71 271.9 182 74.7
Rhsim04G0210600 Rhododendron simsii HOM05D014702 ORTHO05D013331 2.3e-61 239.2 197 66.5
Rhsim04G0210700 Rhododendron simsii HOM05D000007 ORTHO05D013331 4.4e-44 181.8 132 73.5
Rhsim04G0211000 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.5e-31 140.2 135 57.8
Rhsim09G0024800 Rhododendron simsii HOM05D014702 ORTHO05D013331 6.1e-30 134.8 164 47.6
Rhsim04G0211100 Rhododendron simsii HOM05D014702 ORTHO05D013331 2.3e-29 132.9 200 42.0
Rhsim09G0024700 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.3e-27 127.1 214 39.7
Rhsim04G0211400 Rhododendron simsii HOM05D000007 ORTHO05D013331 6.4e-27 124.8 109 61.5
Rhsim04G0210500 Rhododendron simsii HOM05D014702 ORTHO05D013331 3.2e-26 122.5 166 44.6
Rhsim04G0211300 Rhododendron simsii HOM05D014702 ORTHO05D013331 2.0e-20 103.2 148 45.9
Rhsim04G0210400 Rhododendron simsii HOM05D008700 ORTHO05D010645 2.6e-20 102.8 166 39.8
Rhsim04G0210900 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.1e-18 97.4 107 49.5
Rhsim04G0210300 Rhododendron simsii HOM05D000007 ORTHO05D013331 3.9e-16 89.0 124 40.3
vmacro08249 Vaccinium macrocarpon HOM05D000845 ORTHO05D001925 1.3e-11 73.9 189 31.2
Gorai.004G021300 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.1e-09 66.6 123 35.8
Gohir.D08G025800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.7e-08 63.5 123 34.1
Migut.N00548 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.3e-08 63.2 76 36.8
Hma1.2p1_0187F.1_g081860 Hydrangea macrophylla HOM05D000007 ORTHO05D005385 2.3e-08 63.2 113 35.4
Nitab4.5_0004974g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.1e-08 62.0 67 44.8
Migut.N00549 Erythranthe guttata HOM05D000007 ORTHO05D000017 8.6e-08 61.2 99 30.3
Peaxi162Scf00047g00635 Petunia axillaris HOM05D000007 ORTHO05D000017 8.6e-08 61.2 86 38.4
Peaxi162Scf00231g00246 Petunia axillaris HOM05D000007 ORTHO05D000017 1.1e-07 60.8 78 38.5
Potri.001G318400 Populus trichocarpa HOM05D000007 ORTHO05D000017 1.1e-07 60.8 126 31.0
PGSC0003DMG400045722 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-07 60.8 101 32.7
Dinv44473 Davidia involucrata HOM05D000007 ORTHO05D000017 1.5e-07 60.5 87 40.2
Cc00_g01300 Coffea canephora HOM05D000007 ORTHO05D000017 5.6e-07 58.5 114 35.1
Thecc.04G197200 Theobroma cacao HOM05D000007 ORTHO05D000017 5.6e-07 58.5 94 35.1
BraA02t07538Z Brassica rapa HOM05D000007 ORTHO05D000017 7.3e-07 58.2 91 37.4
Haze_25865 Corylus avellana HOM05D000007 ORTHO05D000017 7.3e-07 58.2 88 35.2
Peaxi162Scf00231g00121 Petunia axillaris HOM05D000007 ORTHO05D000017 7.3e-07 58.2 115 30.4
Aqoxy5G01823 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 9.5e-07 57.8 96 30.2
A02p25510 Brassica napus HOM05D000007 ORTHO05D000017 9.5e-07 57.8 91 37.4
Nitab4.5_0004771g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-06 57.4 85 42.4
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 1.2e-06 57.4 96 39.6
PGSC0003DMG400039904 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.2e-06 57.4 83 34.9
vmacro03637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.2e-06 57.4 92 35.9
Cfa003137 Carpinus fangiana HOM05D000007 ORTHO05D000017 1.6e-06 57.0 88 34.1
Dinv29578 Davidia involucrata HOM05D000007 ORTHO05D005385 1.6e-06 57.0 242 25.6
RcHm_v2.0_Chr2g0154551 Rosa chinensis HOM05D000007 ORTHO05D000017 1.6e-06 57.0 93 34.4
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 2.1e-06 56.6 92 35.9
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 2.1e-06 56.6 109 35.8
PGSC0003DMG400044834 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.1e-06 56.6 82 35.4
Gorai.004G021600 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.8e-06 56.2 108 34.3
Peaxi162Scf00009g02530 Petunia axillaris HOM05D000007 ORTHO05D000017 2.8e-06 56.2 90 35.6
Rhsim05G0180800 Rhododendron simsii HOM05D000007 ORTHO05D000017 2.8e-06 56.2 116 32.8
Gohir.A08G015132 Gossypium hirsutum HOM05D000007 ORTHO05D000017 3.6e-06 55.8 119 32.8
Nitab4.5_0000271g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.6e-06 55.8 79 35.4
PSO782G1006 Papaver somniferum HOM05D000007 ORTHO05D000017 3.6e-06 55.8 69 37.7
Ciclev10006809m.g Citrus clementina HOM05D000007 ORTHO05D000017 4.7e-06 55.5 126 29.4
Dinv38361 Davidia involucrata HOM05D000007 ORTHO05D000017 4.7e-06 55.5 118 32.2
Sc05g0008360 Simmondsia chinensis HOM05D000007 ORTHO05D000017 4.7e-06 55.5 94 34.0
PGSC0003DMG400031300 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.7e-06 55.5 67 43.3
PGSC0003DMG400043773 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.7e-06 55.5 80 35.0
RcHm_v2.0_Chr2g0107851 Rosa chinensis HOM05D000007 ORTHO05D000017 6.2e-06 55.1 80 36.2
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 8.1e-06 54.7 128 32.8
COL.COLO4_24613 Corchorus olitorius HOM05D000007 ORTHO05D000017 8.1e-06 54.7 121 31.4
Dinv44466 Davidia involucrata HOM05D000007 ORTHO05D000017 8.1e-06 54.7 92 35.9
Gorai.004G021200 Gossypium raimondii HOM05D000007 ORTHO05D000017 8.1e-06 54.7 105 31.4
PSO339G0424 Papaver somniferum HOM05D000007 ORTHO05D000017 8.1e-06 54.7 85 40.0
PSO339G0468 Papaver somniferum HOM05D000007 ORTHO05D000017 8.1e-06 54.7 85 40.0
Potri.017G058000 Populus trichocarpa HOM05D000007 ORTHO05D000017 8.1e-06 54.7 120 31.7
PGSC0003DMG400031293 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.1e-06 54.7 94 34.0


User provided reference genes

Program Settings