Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0210500 Rhododendron simsii HOM05D014702 ORTHO05D013331 9.1e-89 330.1 155 100.0
Rhsim04G0210600 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.4e-76 289.7 221 68.3
Rhsim09G0024700 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.0e-39 167.2 213 46.9
Rhsim04G0211100 Rhododendron simsii HOM05D014702 ORTHO05D013331 5.1e-39 164.9 200 49.5
Rhsim09G0024800 Rhododendron simsii HOM05D014702 ORTHO05D013331 8.7e-39 164.1 175 52.6
Rhsim04G0210900 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.1e-36 157.1 78 94.9
Rhsim04G0211000 Rhododendron simsii HOM05D014702 ORTHO05D013331 9.0e-36 154.1 256 41.4
Rhsim04G0210700 Rhododendron simsii HOM05D000007 ORTHO05D013331 1.2e-32 143.7 289 36.3
Rhsim04G0211200 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.0e-26 124.0 166 44.6
Rhsim04G0210800 Rhododendron simsii HOM05D014702 ORTHO05D013331 1.6e-24 116.7 179 40.8
Rhsim04G0210400 Rhododendron simsii HOM05D008700 ORTHO05D010645 3.5e-24 115.5 153 47.1
Rhsim04G0211400 Rhododendron simsii HOM05D000007 ORTHO05D013331 3.7e-21 105.5 78 61.5
Rhsim04G0210300 Rhododendron simsii HOM05D000007 ORTHO05D013331 7.9e-16 87.8 78 52.6
vmacro08249 Vaccinium macrocarpon HOM05D000845 ORTHO05D001925 3.8e-10 68.9 59 55.9
PSO017G2834 Papaver somniferum HOM05D000007 ORTHO05D013331 8.5e-10 67.8 79 46.8
Peaxi162Scf00231g00116 Petunia axillaris HOM05D000007 ORTHO05D000017 2.7e-08 62.8 74 43.2
Peaxi162Scf00009g02613 Petunia axillaris HOM05D000007 ORTHO05D000017 3.6e-08 62.4 71 49.3
Rhsim04G0211300 Rhododendron simsii HOM05D014702 ORTHO05D013331 4.6e-08 62.0 147 31.3
PSO017G7169 Papaver somniferum HOM05D000007 ORTHO05D000017 6.1e-08 61.6 76 42.1
PSO170G0179 Papaver somniferum HOM05D000007 ORTHO05D000017 6.1e-08 61.6 89 40.4
Peaxi162Scf00009g02530 Petunia axillaris HOM05D000007 ORTHO05D000017 6.1e-08 61.6 76 46.1
PGSC0003DMG400045722 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.1e-08 61.6 64 43.8
A02p25510 Brassica napus HOM05D000007 ORTHO05D000017 7.9e-08 61.2 102 37.3
BraA02t07538Z Brassica rapa HOM05D000007 ORTHO05D000017 1.0e-07 60.8 102 36.3
vmacro08250 Vaccinium macrocarpon HOM05D000007 ORTHO05D023101 1.0e-07 60.8 75 41.3
Peaxi162Scf00047g00635 Petunia axillaris HOM05D000007 ORTHO05D000017 1.4e-07 60.5 64 48.4
PGSC0003DMG400039904 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-07 60.5 64 43.8
FvH4_3g15782 Fragaria vesca HOM05D000007 ORTHO05D000017 2.3e-07 59.7 86 34.9
FAN11G3461 Fragaria x ananassa HOM05D001622 ORTHO05D002989 2.3e-07 59.7 86 34.9
Dinv38272 Davidia involucrata HOM05D000007 ORTHO05D010342 3.0e-07 59.3 79 39.2
Gorai.004G021300 Gossypium raimondii HOM05D000007 ORTHO05D000017 3.9e-07 58.9 87 36.8
PSO017G6823 Papaver somniferum HOM05D000007 ORTHO05D000017 3.9e-07 58.9 93 38.7
Peaxi162Scf00231g00121 Petunia axillaris HOM05D000007 ORTHO05D000017 3.9e-07 58.9 71 42.3
Peaxi162Scf00231g00246 Petunia axillaris HOM05D000007 ORTHO05D000017 3.9e-07 58.9 71 43.7
Migut.N00548 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.1e-07 58.5 72 44.4
PGSC0003DMG400043773 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.1e-07 58.5 64 42.2
Dinv32031 Davidia involucrata HOM05D000007 ORTHO05D000017 6.7e-07 58.2 74 41.9
Nitab4.5_0000271g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.7e-07 58.2 75 41.3
BcaB05g23737 Brassica carinata HOM05D000007 ORTHO05D000017 8.8e-07 57.8 94 36.2
BcaC03g16267 Brassica carinata HOM05D000007 ORTHO05D000017 8.8e-07 57.8 94 36.2
C02p40630 Brassica napus HOM05D000007 ORTHO05D000017 8.8e-07 57.8 94 36.2
BolC2t10085H Brassica oleracea HOM05D000007 ORTHO05D000017 8.8e-07 57.8 94 36.2
ClCG01G010140 Citrullus lanatus HOM05D000007 ORTHO05D000017 8.8e-07 57.8 87 33.3
Thhalv10028697m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 8.8e-07 57.8 94 33.0
Lj3P918T21 Lonicera japonica HOM05D000007 ORTHO05D013331 1.1e-06 57.4 81 35.8
Lj3P918T26 Lonicera japonica HOM05D000007 ORTHO05D000017 1.5e-06 57.0 76 40.8
PGSC0003DMG400031300 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-06 57.0 63 46.0
Hma1.2p1_0657F.1_g197080 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.0e-06 56.6 75 40.0
Lj3C973T7 Lonicera japonica HOM05D000007 ORTHO05D000017 2.0e-06 56.6 64 51.6
Sp6g04950 Schrenkiella parvula HOM05D000007 ORTHO05D000017 2.0e-06 56.6 118 29.7
Migut.N00063 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.5e-06 56.2 81 34.6
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 2.5e-06 56.2 84 34.5
PSO782G1006 Papaver somniferum HOM05D000007 ORTHO05D000017 2.5e-06 56.2 73 39.7
Gohir.D08G025800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 3.3e-06 55.8 87 34.5
PSO063G7508 Papaver somniferum HOM05D000007 ORTHO05D000017 3.3e-06 55.8 69 42.0
Peaxi162Scf00613g00031 Petunia axillaris HOM05D000007 ORTHO05D000017 3.3e-06 55.8 63 41.3
Peaxi162Scf00718g00028 Petunia axillaris HOM05D000007 ORTHO05D000017 3.3e-06 55.8 76 36.8
QL02p063538 Quercus lobata HOM05D000007 ORTHO05D000017 3.3e-06 55.8 68 42.6
Sopen09g005030 Solanum pennellii HOM05D000007 ORTHO05D000017 3.3e-06 55.8 72 36.1
AUR62014647 Chenopodium quinoa HOM05D000007 ORTHO05D000017 4.3e-06 55.5 115 37.4
Thecc.04G270300 Theobroma cacao HOM05D000007 ORTHO05D000017 4.3e-06 55.5 85 36.5
Carub.0006s3183 Capsella rubella HOM05D000007 ORTHO05D000017 5.7e-06 55.1 94 35.1
FvH4_4g09850 Fragaria vesca HOM05D000007 ORTHO05D000017 5.7e-06 55.1 73 41.1
FAN07G2041 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.7e-06 55.1 73 41.1
Nitab4.5_0002755g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.7e-06 55.1 71 42.3
Solyc09g091710.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 5.7e-06 55.1 71 40.8
Sopen09g034610 Solanum pennellii HOM05D000007 ORTHO05D000017 5.7e-06 55.1 71 40.8
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 5.7e-06 55.1 70 42.9
BcaC01g00777 Brassica carinata HOM05D000007 ORTHO05D000017 7.4e-06 54.7 86 34.9
BolC3t20695H Brassica oleracea HOM05D000007 ORTHO05D000017 7.4e-06 54.7 86 34.9
Dinv30807 Davidia involucrata HOM05D000007 ORTHO05D000017 7.4e-06 54.7 63 42.9
Duzib268G0983 Durio zibethinus HOM05D000007 ORTHO05D000017 7.4e-06 54.7 76 35.5
FvH4_6g39910 Fragaria vesca HOM05D000007 ORTHO05D000017 7.4e-06 54.7 74 37.8
Gorai.004G021600 Gossypium raimondii HOM05D000007 ORTHO05D000017 7.4e-06 54.7 57 45.6
Cpa.g.sc75.108 Carica papaya HOM05D000007 ORTHO05D000017 9.7e-06 54.3 78 39.7
Duzib268G1653 Durio zibethinus HOM05D000007 ORTHO05D000017 9.7e-06 54.3 76 38.2
Nitab4.5_0004771g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.7e-06 54.3 57 45.6
PGR083G2787 Punica granatum HOM05D000007 ORTHO05D000017 9.7e-06 54.3 81 40.7


User provided reference genes

Program Settings