Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0206100 Rhododendron simsii HOM05D018759 ORTHO05D012721 3.6e-103 378.3 188 100.0
Rhsim04G0206200 Rhododendron simsii HOM05D018759 ORTHO05D012721 6.8e-46 188.0 192 63.0
Rhsim13G0209800 Rhododendron simsii HOM05D018759 ORTHO05D012721 1.8e-14 83.6 113 44.2
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.4e-12 74.7 185 34.1
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.4e-12 74.7 184 34.2
MD14G1037500 Malus domestica HOM05D002687 ORTHO05D002052 4.6e-10 68.9 174 33.3
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.9e-10 68.2 82 45.1
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.9e-09 65.9 176 36.4
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 6.7e-09 65.1 189 28.6
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 6.7e-09 65.1 96 39.6
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 6.7e-09 65.1 96 39.6
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 1.1e-08 64.3 171 31.6
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 2.5e-08 63.2 158 35.4
RhsimUnG0194500 Rhododendron simsii HOM05D018759 ORTHO05D012721 4.3e-08 62.4 139 35.3
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.3e-07 60.8 141 37.6
CSS0036580 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 2.1e-07 60.1 102 37.3
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 2.1e-07 60.1 167 30.5
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 3.7e-07 59.3 83 41.0
Potri.001G218201 Populus trichocarpa HOM05D022489 ORTHO05D024835 3.7e-07 59.3 81 39.5
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 4.8e-07 58.9 154 32.5
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 4.8e-07 58.9 83 39.8
Dinv31534 Davidia involucrata HOM05D002687 ORTHO05D002052 6.2e-07 58.5 89 37.1
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 6.2e-07 58.5 166 31.9
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 1.4e-06 57.4 84 36.9
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.4e-06 57.4 85 36.5
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 1.8e-06 57.0 153 30.1
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.8e-06 57.0 160 30.0
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 2.4e-06 56.6 79 39.2
Cpa.g.sc1142.1 Carica papaya HOM05D002687 ORTHO05D002052 3.1e-06 56.2 82 34.1
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 3.1e-06 56.2 194 28.4
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 5.3e-06 55.5 114 36.0
Potri.001G218300 Populus trichocarpa HOM05D002687 ORTHO05D002052 5.3e-06 55.5 163 29.4
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 5.3e-06 55.5 171 29.2
Dinv35090 Davidia involucrata HOM05D000957 ORTHO05D000754 6.9e-06 55.1 81 39.5
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 6.9e-06 55.1 161 29.8
Rhsim01G0070800 Rhododendron simsii HOM05D018759 ORTHO05D012721 6.9e-06 55.1 53 50.9
RhsimUnG0194400 Rhododendron simsii HOM05D018759 ORTHO05D012721 6.9e-06 55.1 53 50.9
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 6.9e-06 55.1 171 29.2
FvH4_6g41370 Fragaria vesca HOM05D017088 ORTHO05D012721 9.0e-06 54.7 84 40.5
FAN14G5034 Fragaria x ananassa HOM05D017088 ORTHO05D012721 9.0e-06 54.7 84 40.5
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 9.0e-06 54.7 84 40.5


User provided reference genes

Program Settings