Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 6.7e-91 337.4 180 100.0
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 9.4e-37 157.5 181 59.1
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 5.7e-34 148.3 186 55.4
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 9.8e-34 147.5 185 51.9
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 8.3e-33 144.4 181 51.4
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.8e-32 143.3 108 72.2
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 7.0e-32 141.4 182 51.1
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 1.2e-31 140.6 186 53.2
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 4.5e-31 138.7 192 47.9
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 7.7e-31 137.9 181 50.8
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.0e-30 137.5 117 69.2
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.0e-30 137.5 117 69.2
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.8e-30 135.6 174 50.6
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 3.8e-30 135.6 186 50.5
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 5.0e-30 135.2 185 50.8
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 5.0e-30 135.2 185 50.8
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 5.0e-30 135.2 185 50.8
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 8.6e-30 134.4 173 50.9
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 8.6e-30 134.4 173 50.9
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 8.6e-30 134.4 173 51.4
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 8.6e-30 134.4 109 68.8
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.1e-29 134.0 162 53.7
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.5e-29 133.7 182 50.0
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 1.5e-29 133.7 185 50.8
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.9e-29 133.3 119 63.0
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 3.2e-29 132.5 180 49.4
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 7.2e-29 131.3 170 52.4
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 9.5e-29 131.0 185 50.3
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.2e-28 130.6 185 47.0
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.2e-28 130.6 186 46.2
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 2.1e-28 129.8 185 52.4
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 2.1e-28 129.8 182 48.4
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 2.8e-28 129.4 182 52.2
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.0e-27 127.5 87 74.7
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 5.2e-27 125.2 120 59.2
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 6.8e-27 124.8 176 48.9
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.2e-26 124.0 176 50.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.2e-26 124.0 198 47.0
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 1.5e-26 123.6 174 48.3
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.5e-26 123.6 91 71.4
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 2.6e-26 122.9 79 81.0
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 3.4e-26 122.5 120 58.3
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 3.4e-26 122.5 120 58.3
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 3.4e-26 122.5 187 48.7
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 3.4e-26 122.5 119 59.7
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.4e-26 122.5 179 49.2
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 4.4e-26 122.1 179 46.4
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 4.4e-26 122.1 176 49.4
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 4.4e-26 122.1 91 70.3
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 4.4e-26 122.1 135 56.3
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 5.7e-26 121.7 120 58.3
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 5.7e-26 121.7 95 66.3
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 9.8e-26 120.9 181 46.4
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 9.8e-26 120.9 121 55.4
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 9.8e-26 120.9 180 52.8
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.3e-25 120.6 182 44.5
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 1.3e-25 120.6 91 69.2
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 2.2e-25 119.8 152 51.3
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 2.2e-25 119.8 92 70.7
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 2.8e-25 119.4 85 72.9
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.7e-25 119.0 121 55.4
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 6.3e-25 118.2 121 54.5
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 8.3e-25 117.9 87 67.8
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 1.1e-24 117.5 183 47.5
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.4e-24 117.1 170 51.8
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.8e-24 116.7 159 49.1
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.8e-24 116.7 158 48.7
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.8e-24 116.7 93 67.7
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.8e-24 116.7 184 47.8
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 2.4e-24 116.3 188 45.2
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 7.0e-24 114.8 132 52.3
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 7.0e-24 114.8 112 61.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 9.2e-24 114.4 101 65.3
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 2.7e-23 112.8 105 61.9
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 3.5e-23 112.5 190 46.8
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 3.5e-23 112.5 167 47.3
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 3.5e-23 112.5 122 56.6
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 4.5e-23 112.1 74 74.3
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 5.9e-23 111.7 184 44.0
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 5.9e-23 111.7 177 48.0
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 5.9e-23 111.7 184 45.1
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 1.0e-22 110.9 64 85.9
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.0e-22 110.9 66 80.3
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.3e-22 109.8 123 55.3
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.8e-22 109.0 181 43.1
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 6.6e-22 108.2 79 69.6
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 6.6e-22 108.2 188 44.7
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 1.1e-21 107.5 137 48.9
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 2.5e-21 106.3 113 54.9
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 5.6e-21 105.1 125 49.6
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 5.6e-21 105.1 128 46.9
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 1.2e-20 104.0 150 46.0
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 4.7e-20 102.1 177 40.1
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.3e-19 99.8 184 44.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 6.8e-19 98.2 87 63.2
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 3.4e-18 95.9 60 78.3
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 4.4e-18 95.5 85 60.0
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 6.4e-17 91.7 135 45.2
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 9.2e-16 87.8 65 66.2
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 3.3e-13 79.3 125 44.0
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.2e-12 77.4 155 40.6
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 3.6e-12 75.9 69 62.3
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 2.0e-10 70.1 154 35.1
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 5.8e-10 68.6 92 42.4
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.2e-07 60.8 126 35.7
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 7.8e-07 58.2 166 33.7


User provided reference genes

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