Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 1.2e-129 466.5 227 100.0
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 3.7e-107 391.7 223 85.2
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 3.4e-92 342.0 228 73.7
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 3.4e-92 342.0 228 73.7
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 3.8e-83 312.0 227 71.8
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 2.7e-81 305.8 210 71.9
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 1.9e-79 299.7 224 68.3
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 3.3e-79 298.9 224 68.3
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 5.6e-79 298.1 218 68.3
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 6.2e-78 294.7 223 65.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 1.8e-77 293.1 224 65.2
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.4e-77 292.7 224 65.2
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.2e-76 290.4 224 64.7
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.5e-76 290.0 213 66.7
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 2.6e-76 289.3 221 64.3
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 3.4e-76 288.9 220 64.1
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 3.4e-76 288.9 224 64.7
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 4.5e-76 288.5 225 64.9
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 5.8e-76 288.1 225 66.7
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 7.6e-76 287.7 224 66.1
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 7.6e-76 287.7 224 66.1
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 7.6e-76 287.7 233 62.7
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 1.3e-75 287.0 225 62.2
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 2.2e-75 286.2 214 65.0
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 4.9e-75 285.0 224 64.3
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 4.9e-75 285.0 218 65.6
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 6.5e-75 284.6 220 65.9
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 6.5e-75 284.6 219 65.3
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.4e-74 283.5 222 65.8
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 2.5e-74 282.7 223 64.6
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 3.2e-74 282.3 201 71.1
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 5.5e-74 281.6 228 62.3
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.6e-73 280.0 163 76.1
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 4.6e-73 278.5 217 63.6
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 7.9e-73 277.7 228 61.8
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 1.0e-72 277.3 228 63.6
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.3e-72 276.9 227 63.0
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 1.1e-71 273.9 223 62.8
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 1.9e-71 273.1 218 64.2
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 4.3e-71 271.9 171 73.7
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.3e-70 270.4 227 63.4
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 6.2e-70 268.1 223 62.8
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 1.4e-69 266.9 218 62.8
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 1.8e-69 266.5 173 70.5
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 1.5e-68 263.5 220 60.5
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 2.0e-68 263.1 223 60.5
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 2.0e-68 263.1 242 57.0
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 2.0e-68 263.1 220 62.3
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 2.6e-68 262.7 223 60.5
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 3.4e-68 262.3 227 58.6
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 5.8e-68 261.5 223 60.1
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 7.6e-68 261.2 191 63.9
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 1.0e-67 260.8 223 60.1
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 1.0e-67 260.8 223 60.1
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 1.0e-67 260.8 223 60.1
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 1.0e-67 260.8 220 59.5
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.3e-67 260.4 218 60.1
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 2.9e-67 259.2 224 57.1
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 2.9e-67 259.2 163 73.6
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 3.8e-67 258.8 219 58.0
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 3.8e-67 258.8 220 60.0
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 5.0e-67 258.5 223 61.0
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.1e-66 257.3 157 71.3
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 5.5e-66 255.0 227 56.8
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 1.2e-65 253.8 221 59.7
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 2.1e-65 253.1 215 60.0
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 4.6e-65 251.9 172 66.3
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.0e-64 250.8 230 58.7
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.8e-64 250.0 212 58.5
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 2.3e-64 249.6 191 61.8
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 3.0e-64 249.2 212 58.5
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.9e-64 248.8 212 58.0
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 5.1e-64 248.4 169 66.9
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.9e-63 246.5 185 63.2
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.9e-63 246.5 168 67.9
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 3.3e-63 245.7 221 59.3
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 4.3e-63 245.4 222 57.2
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 9.7e-63 244.2 183 60.1
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 5.3e-61 238.4 176 65.3
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 5.3e-61 238.4 225 55.1
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.0e-60 236.5 324 44.8
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 2.9e-59 232.6 219 55.7
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 3.8e-59 232.3 224 54.9
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 4.2e-58 228.8 225 53.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 4.6e-57 225.3 148 67.6
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 2.0e-55 219.9 132 74.2
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.3e-51 207.2 127 70.1
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.4e-47 191.4 107 80.4
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 9.7e-47 191.0 107 79.4
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 2.2e-46 189.9 119 74.8
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 1.5e-42 177.2 109 70.6
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 9.7e-39 164.5 157 58.0
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.3e-38 164.1 223 43.9
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 2.8e-38 162.9 172 48.8
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 2.4e-29 133.3 117 56.4
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 2.9e-27 126.3 147 50.3
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.5e-26 124.0 79 73.4
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 6.8e-24 115.2 104 55.8
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 4.5e-20 102.4 132 44.7
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 1.7e-19 100.5 127 42.5
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 8.6e-19 98.2 131 41.2
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 1.9e-18 97.1 133 40.6
Actinidia04494 Actinidia chinensis HOM05D007412 ORTHO05D009313 6.4e-14 82.0 76 60.5
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 5.4e-13 79.0 43 81.4
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 1.0e-11 74.7 125 36.0
SEGI_03305 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 4.9e-06 55.8 107 37.4


User provided reference genes

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