Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 4.9e-94 347.8 178 100.0
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.3e-22 110.5 195 45.1
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 3.8e-22 109.0 193 42.5
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 1.9e-21 106.7 189 44.4
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 7.9e-20 101.3 190 41.6
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 1.4e-19 100.5 216 40.3
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 5.7e-18 95.1 180 39.4
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 7.4e-18 94.7 183 39.9
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 7.4e-18 94.7 216 38.9
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 2.2e-17 93.2 190 38.9
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 2.2e-17 93.2 181 37.0
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 8.2e-17 91.3 190 38.9
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 1.1e-16 90.9 197 41.1
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 1.8e-16 90.1 220 34.5
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 1.8e-16 90.1 235 35.7
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 2.4e-16 89.7 189 39.2
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 2.4e-16 89.7 232 35.3
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 2.4e-16 89.7 190 38.4
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 3.1e-16 89.4 198 38.9
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 4.1e-16 89.0 189 40.2
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 5.3e-16 88.6 179 41.3
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 5.3e-16 88.6 174 37.9
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 5.3e-16 88.6 188 37.8
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 6.9e-16 88.2 190 38.4
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 9.1e-16 87.8 186 35.5
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.2e-15 87.4 189 39.2
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 1.5e-15 87.0 199 37.2
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 2.0e-15 86.7 189 38.1
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 2.0e-15 86.7 205 37.1
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 2.6e-15 86.3 186 36.0
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 3.4e-15 85.9 189 38.6
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 5.9e-15 85.1 192 34.9
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 1.7e-14 83.6 192 34.4
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 1.7e-14 83.6 233 33.0
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 1.7e-14 83.6 195 37.9
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 3.8e-14 82.4 199 37.2
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 5.0e-14 82.0 203 34.5
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 8.5e-14 81.3 182 40.7
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 8.5e-14 81.3 202 36.6
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 1.4e-13 80.5 191 34.6
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 1.9e-13 80.1 198 37.4
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 1.9e-13 80.1 213 35.7
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 1.9e-13 80.1 235 30.6
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 2.5e-13 79.7 202 34.2
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 2.5e-13 79.7 209 33.5
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 3.2e-13 79.3 194 34.0
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 7.2e-13 78.2 207 35.7
Actinidia01843 Actinidia chinensis HOM05D007526 ORTHO05D009350 9.4e-13 77.8 72 56.9
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 9.4e-13 77.8 185 36.2
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 1.6e-12 77.0 217 35.0
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 3.6e-12 75.9 204 34.3
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 4.7e-12 75.5 219 33.8
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 6.1e-12 75.1 199 36.2
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 1.8e-11 73.6 190 35.3
EL10Ac3g05005 Beta vulgaris HOM05D007526 ORTHO05D009350 3.0e-11 72.8 214 33.6
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 5.2e-11 72.0 193 37.3
AUR62015571 Chenopodium quinoa HOM05D007526 ORTHO05D009350 1.1e-10 70.9 206 33.0
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 1.5e-10 70.5 191 32.5
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 2.0e-10 70.1 205 31.2
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 4.4e-10 68.9 236 31.4
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 5.7e-10 68.6 203 33.0
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 9.7e-10 67.8 197 32.5
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.7e-09 67.0 194 36.1
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 1.7e-09 67.0 242 31.4
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 2.2e-09 66.6 193 34.7
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 6.3e-09 65.1 184 34.2
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 1.1e-08 64.3 187 30.5
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 2.4e-08 63.2 56 62.5
Lsat_1_v5_gn_3_120620 Lactuca sativa HOM05D064852 ORTHO05D009350 3.1e-08 62.8 139 37.4
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 3.1e-08 62.8 197 33.0
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 5.3e-08 62.0 186 33.3
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 9.1e-08 61.2 183 31.7
Migut.G00517 Erythranthe guttata HOM05D007526 ORTHO05D009350 1.2e-07 60.8 42 66.7
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 2.6e-07 59.7 193 31.6
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 5.9e-07 58.5 188 29.3
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 5.9e-07 58.5 190 34.2
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 5.9e-07 58.5 239 29.3
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 5.9e-07 58.5 186 33.3
Dinv27054 Davidia involucrata HOM05D007526 ORTHO05D009350 7.7e-07 58.2 71 49.3
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 1.0e-06 57.8 195 30.8
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.3e-06 57.4 202 28.7
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 1.7e-06 57.0 109 35.8
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.2e-06 56.6 198 27.3
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 2.2e-06 56.6 166 33.1
TPR.G1498 Trifolium pratense HOM05D007526 ORTHO05D009350 2.2e-06 56.6 174 29.3
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.9e-06 56.2 183 30.6
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 2.9e-06 56.2 183 30.6
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 3.8e-06 55.8 205 30.2
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 5.0e-06 55.5 186 30.1
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.0e-06 55.5 194 29.9
Lalb_Chr10g0098881 Lupinus albus HOM05D007526 ORTHO05D009350 5.0e-06 55.5 183 30.6
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 6.5e-06 55.1 209 31.1


User provided reference genes

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