Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 3.8e-91 338.2 175 100.0
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 6.7e-64 247.7 177 78.5
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 5.2e-48 194.9 162 64.2
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 4.5e-44 181.8 173 58.4
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 5.9e-44 181.4 118 78.0
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 1.0e-43 180.6 166 60.2
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.7e-43 179.9 128 72.7
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 5.0e-43 178.3 197 55.8
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 5.0e-43 178.3 158 60.8
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 6.6e-43 177.9 131 69.5
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 6.6e-43 177.9 157 59.9
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 9.5e-42 174.1 119 72.3
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 2.8e-41 172.6 111 75.7
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 2.8e-41 172.6 132 66.7
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 8.0e-41 171.0 137 66.4
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 8.0e-41 171.0 131 67.9
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 2.3e-40 169.5 163 58.9
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 5.2e-40 168.3 119 68.9
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 6.8e-40 167.9 186 54.8
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.0e-39 166.4 123 68.3
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 2.6e-39 166.0 117 69.2
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 7.5e-39 164.5 116 71.6
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 9.8e-39 164.1 153 58.2
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 1.3e-38 163.7 164 55.5
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.3e-38 163.7 130 66.2
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.7e-38 163.3 167 55.1
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 3.7e-38 162.2 123 66.7
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 4.9e-38 161.8 128 66.4
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 6.4e-38 161.4 174 51.1
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.1e-37 160.6 126 65.1
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 1.4e-37 160.2 98 74.5
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 2.4e-37 159.5 124 64.5
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 3.2e-37 159.1 112 68.8
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 3.2e-37 159.1 152 57.2
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 4.1e-37 158.7 97 76.3
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 9.2e-37 157.5 127 64.6
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 9.2e-37 157.5 118 66.1
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 2.0e-36 156.4 109 69.7
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 2.7e-36 156.0 128 63.3
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.7e-36 156.0 123 65.9
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 3.5e-36 155.6 143 54.5
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 5.9e-36 154.8 164 53.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 5.9e-36 154.8 126 62.7
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 7.8e-36 154.5 133 60.9
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.3e-35 153.7 181 50.8
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.7e-35 153.3 135 62.2
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 3.9e-35 152.1 128 62.5
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.6e-35 151.4 123 63.4
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 6.6e-35 151.4 185 50.3
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 6.6e-35 151.4 151 57.6
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 8.6e-35 151.0 89 78.7
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.1e-34 150.6 184 50.0
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.1e-34 150.6 151 58.3
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 1.5e-34 150.2 118 64.4
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.5e-34 150.2 126 61.9
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.5e-34 150.2 114 70.2
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.9e-34 149.8 184 50.5
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.3e-34 149.1 184 50.0
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 4.3e-34 148.7 118 63.6
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 4.3e-34 148.7 118 63.6
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 7.3e-34 147.9 122 63.9
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 7.3e-34 147.9 122 63.9
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 9.5e-34 147.5 111 62.2
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 2.1e-33 146.4 92 76.1
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 2.8e-33 146.0 88 72.7
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 3.6e-33 145.6 169 49.7
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 4.7e-33 145.2 185 49.7
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 4.7e-33 145.2 92 75.0
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 1.0e-32 144.1 123 62.6
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 1.4e-32 143.7 167 47.9
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.8e-32 143.3 112 63.4
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 4.0e-32 142.1 131 53.4
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 5.2e-32 141.7 118 61.9
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 5.2e-32 141.7 125 57.6
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 2.6e-31 139.4 87 70.1
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 5.8e-31 138.3 114 60.5
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 6.4e-30 134.8 167 47.3
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.9e-29 133.3 80 77.5
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 2.4e-29 132.9 165 47.9
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 3.2e-29 132.5 96 64.6
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.7e-28 129.4 102 64.7
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 3.3e-26 122.5 86 67.4
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 2.2e-22 109.8 90 54.4
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 3.7e-22 109.0 73 67.1
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 2.5e-18 96.3 90 50.0
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 2.3e-16 89.7 109 50.5
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 1.5e-15 87.0 121 40.5
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 6.6e-11 71.6 79 50.6
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.5e-10 69.7 95 44.2
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 9.6e-10 67.8 89 42.7
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 6.2e-09 65.1 46 69.6
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 1.1e-08 64.3 118 44.1
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 1.2e-07 60.8 84 47.6
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 2.6e-07 59.7 65 52.3


User provided reference genes

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