Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 3.2e-105 385.2 207 100.0
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 4.6e-88 328.2 207 78.7
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 4.8e-85 318.2 207 78.7
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 8.2e-85 317.4 209 77.5
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 3.4e-83 312.0 209 75.1
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 1.0e-82 310.5 207 76.8
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 4.7e-80 301.6 210 71.4
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 6.1e-80 301.2 214 69.6
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 2.3e-79 299.3 214 69.2
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 3.7e-77 292.0 197 71.1
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 1.4e-76 290.0 206 69.4
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.2e-75 287.0 213 67.1
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 1.5e-75 286.6 214 68.7
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 1.5e-75 286.6 215 65.6
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 3.4e-75 285.4 211 68.2
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 1.0e-74 283.9 196 70.4
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.3e-74 283.5 207 69.1
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 2.2e-74 282.7 208 68.8
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 3.8e-74 282.0 212 65.6
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 6.5e-74 281.2 208 68.8
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.9e-73 279.6 190 71.6
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 1.9e-73 279.6 207 67.6
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 1.9e-73 279.6 207 67.6
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.9e-73 279.6 193 72.0
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 2.5e-73 279.3 197 68.5
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 3.2e-73 278.9 207 69.1
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 3.2e-73 278.9 208 69.7
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 3.2e-73 278.9 193 71.5
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 5.5e-73 278.1 191 71.7
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 7.2e-73 277.7 208 69.7
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 1.2e-72 276.9 208 69.2
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 2.1e-72 276.2 181 72.4
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 2.1e-72 276.2 214 66.8
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 2.7e-72 275.8 208 69.2
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 6.1e-72 274.6 212 67.5
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 1.0e-71 273.9 182 72.5
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 1.4e-71 273.5 207 64.7
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 3.9e-71 271.9 208 63.9
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 5.2e-71 271.6 207 66.7
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 5.2e-71 271.6 208 67.8
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 5.2e-71 271.6 208 67.8
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 6.7e-71 271.2 205 67.8
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 8.8e-71 270.8 210 67.1
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 1.1e-70 270.4 207 68.1
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.5e-70 270.0 208 66.8
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 3.3e-70 268.9 207 67.6
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 3.3e-70 268.9 193 69.9
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 3.3e-70 268.9 208 66.8
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 7.4e-70 267.7 207 65.7
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 7.4e-70 267.7 207 64.3
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 9.7e-70 267.3 202 67.3
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 1.3e-69 266.9 202 67.3
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 1.7e-69 266.5 204 67.2
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 4.8e-69 265.0 214 66.4
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 6.3e-69 264.6 198 69.2
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 8.2e-69 264.2 204 66.7
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 1.1e-68 263.8 195 68.2
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 1.1e-68 263.8 206 66.0
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.8e-68 263.1 207 65.7
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 4.1e-68 261.9 204 66.7
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 4.1e-68 261.9 148 84.5
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.6e-67 259.2 183 69.4
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 2.6e-67 259.2 207 64.7
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 3.5e-67 258.8 180 70.6
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 4.5e-67 258.5 197 68.5
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 7.7e-67 257.7 199 63.8
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 7.7e-67 257.7 171 72.5
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 1.7e-66 256.5 149 81.9
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 3.8e-66 255.4 195 65.6
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 6.5e-66 254.6 211 62.6
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 1.5e-65 253.4 202 63.4
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 1.9e-65 253.1 202 62.9
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 2.5e-65 252.7 193 65.3
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 7.2e-65 251.1 179 68.2
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 9.4e-65 250.8 174 67.8
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 1.6e-64 250.0 188 66.0
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 1.6e-64 250.0 171 69.6
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 2.1e-64 249.6 202 63.9
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 2.7e-64 249.2 202 63.9
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 4.7e-64 248.4 149 77.9
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 6.1e-64 248.1 149 77.9
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 6.1e-64 248.1 149 77.9
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 6.1e-64 248.1 149 77.9
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 8.0e-64 247.7 149 77.2
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 8.0e-64 247.7 149 77.2
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 8.0e-64 247.7 149 77.2
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 8.0e-64 247.7 149 77.2
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 1.4e-63 246.9 149 77.2
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 1.4e-63 246.9 149 77.2
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 2.3e-63 246.1 149 75.8
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 3.0e-63 245.7 149 76.5
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 1.2e-62 243.8 149 75.8
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 2.0e-62 243.0 219 61.6
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 3.3e-62 242.3 198 63.1
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 3.3e-62 242.3 194 60.8
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 4.4e-62 241.9 149 75.8
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 4.4e-62 241.9 149 75.8
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 4.4e-62 241.9 149 75.8
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 5.7e-62 241.5 196 63.3
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 5.7e-62 241.5 219 60.3
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 2.2e-61 239.6 204 63.2
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 2.2e-61 239.6 219 59.8
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 6.3e-61 238.0 187 61.0
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 1.4e-60 236.9 149 74.5
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 4.1e-60 235.3 181 64.6
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 4.1e-60 235.3 146 89.0
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 7.0e-60 234.6 267 47.9
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 3.5e-59 232.3 185 61.6
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 7.7e-59 231.1 169 66.3
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 1.7e-58 229.9 188 59.0
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 1.1e-57 227.3 233 53.2
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 7.2e-57 224.6 233 53.6
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 3.6e-56 222.2 233 52.4
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 6.1e-56 221.5 265 47.2
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 1.2e-54 217.2 189 63.0
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 9.8e-54 214.2 145 69.0
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 2.8e-53 212.6 145 68.3
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 4.8e-53 211.8 194 56.7
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 1.0e-50 204.1 155 67.1
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.1e-49 200.7 121 79.3
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 3.3e-49 199.1 148 64.2
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 6.1e-48 194.9 131 69.5
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 9.8e-46 187.6 151 61.6
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 2.8e-45 186.0 134 69.4
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 4.1e-44 182.2 205 48.8
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.7e-43 179.5 151 61.6
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 6.6e-42 174.9 117 73.5
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 1.1e-41 174.1 152 61.8
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 3.0e-39 166.0 165 55.8
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 5.2e-39 165.2 144 61.1
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 5.4e-36 155.2 113 62.8
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 1.6e-35 153.7 176 52.8
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 4.6e-35 152.1 108 63.9
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 7.8e-35 151.4 113 61.1
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 1.0e-34 151.0 98 68.4
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 1.2e-30 137.5 92 69.6
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 2.0e-30 136.7 90 70.0
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 3.5e-27 125.9 79 73.4
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 3.5e-27 125.9 79 73.4
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.3e-23 113.2 61 83.6
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 7.8e-19 98.2 77 61.0
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 6.6e-18 95.1 58 75.9
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 1.6e-16 90.5 84 53.6
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 6.2e-16 88.6 59 72.9
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 5.8e-14 82.0 99 48.5
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 9.9e-14 81.3 169 35.5
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 4.6e-11 72.4 54 61.1
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 1.5e-09 67.4 46 60.9
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 7.3e-09 65.1 48 64.6


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