Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0149200 Rhododendron simsii HOM05D004125 ORTHO05D004933 7.8e-258 893.3 444 100.0
vmacro08723 Vaccinium macrocarpon HOM05D004125 ORTHO05D004933 7.1e-94 348.6 309 64.7
Lj2A109G40 Lonicera japonica HOM05D004125 ORTHO05D004933 2.0e-67 260.8 452 40.0
Dinv35730 Davidia involucrata HOM05D004125 ORTHO05D004933 3.8e-63 246.5 456 37.5
Hma1.2p1_0614F.1_g189600 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 3.6e-61 240.0 448 36.8
Dinv37266 Davidia involucrata HOM05D004125 ORTHO05D004933 1.0e-60 238.4 196 64.8
Gohir.A04G075700 Gossypium hirsutum HOM05D004125 ORTHO05D004933 1.4e-60 238.0 440 38.0
Gorai.009G419400 Gossypium raimondii HOM05D004125 ORTHO05D004933 5.1e-60 236.1 440 38.0
CANSAT80G2417 Cannabis sativa HOM05D004125 ORTHO05D004933 1.5e-59 234.6 438 36.5
Gohir.D04G114800 Gossypium hirsutum HOM05D004125 ORTHO05D004933 2.6e-59 233.8 440 36.8
MD04G1102200 Malus domestica HOM05D004125 ORTHO05D004933 8.2e-58 228.8 439 37.4
Sabra06G0102300 Salix brachista HOM05D004125 ORTHO05D004933 1.4e-57 228.0 437 35.2
Thecc.05G056000 Theobroma cacao HOM05D004125 ORTHO05D004933 1.8e-57 227.6 438 37.0
MD12G1121900 Malus domestica HOM05D004125 ORTHO05D004933 2.2e-55 220.7 442 36.2
CSS0038970 Camellia sinensis var. sinensis HOM05D004125 ORTHO05D004933 3.8e-55 219.9 444 35.6
CSS0018032 Camellia sinensis var. sinensis HOM05D004125 ORTHO05D004933 5.0e-55 219.5 447 35.6
HanXRQChr13g0399591 Helianthus annuus HOM05D004125 ORTHO05D004933 1.1e-54 218.4 168 67.3
PGR004G0966 Punica granatum HOM05D004125 ORTHO05D004933 1.1e-54 218.4 162 69.1
Ciclev10012548m.g Citrus clementina HOM05D004125 ORTHO05D004933 2.5e-54 217.2 447 35.3
COL.COLO4_27059 Corchorus olitorius HOM05D004125 ORTHO05D004933 2.5e-54 217.2 436 35.8
Prupe.6G240600 Prunus persica HOM05D004125 ORTHO05D004933 3.2e-54 216.9 443 35.2
Manes.08G004600 Manihot esculenta HOM05D004125 ORTHO05D004933 1.2e-53 214.9 161 69.6
Duzib128G0675 Durio zibethinus HOM05D004125 ORTHO05D004933 1.6e-53 214.5 427 35.6
CiPaw.09G178600 Carya illinoinensis HOM05D004125 ORTHO05D004933 2.1e-53 214.2 449 35.2
Duzib106G0069 Durio zibethinus HOM05D004125 ORTHO05D004933 2.1e-53 214.2 441 33.8
CiPaw.10G136300 Carya illinoinensis HOM05D004125 ORTHO05D004933 3.6e-53 213.4 174 64.9
Sabra16G0093400 Salix brachista HOM05D004125 ORTHO05D004933 3.6e-53 213.4 437 35.5
VMungo1383G2095 Vigna mungo HOM05D004125 ORTHO05D004933 3.6e-53 213.4 429 35.7
Manes.09G077179 Manihot esculenta HOM05D004125 ORTHO05D004933 6.1e-53 212.6 442 34.8
Potri.006G130300 Populus trichocarpa HOM05D004125 ORTHO05D004933 8.0e-53 212.2 158 67.7
PGSC0003DMG400001744 Solanum tuberosum HOM05D004125 ORTHO05D004933 1.0e-52 211.8 168 66.7
Actinidia13097 Actinidia chinensis HOM05D004125 ORTHO05D004933 1.4e-52 211.5 443 34.5
Sopen09g002360 Solanum pennellii HOM05D004125 ORTHO05D004933 1.8e-52 211.1 168 66.1
CiPaw.10G136500 Carya illinoinensis HOM05D004125 ORTHO05D004933 2.3e-52 210.7 166 66.9
Gohir.A01G216300 Gossypium hirsutum HOM05D004125 ORTHO05D004933 5.2e-52 209.5 437 35.0
Gohir.D01G205100 Gossypium hirsutum HOM05D004125 ORTHO05D004933 5.2e-52 209.5 437 35.0
TWI53G0971 Tripterygium wilfordii HOM05D004125 ORTHO05D004933 1.1e-51 208.4 161 66.5
Duzib093G1421 Durio zibethinus HOM05D004125 ORTHO05D004933 1.5e-51 208.0 440 35.2
Nn2g13030 Nelumbo nucifera HOM05D004125 ORTHO05D004933 3.3e-51 206.8 163 66.3
Gorai.002G249400 Gossypium raimondii HOM05D004125 ORTHO05D004933 4.4e-51 206.5 437 34.8
Glyma.19G179500 Glycine max HOM05D004125 ORTHO05D004933 7.4e-51 205.7 440 34.5
Solyc09g007490.3 Solanum lycopersicum HOM05D004125 ORTHO05D004933 7.4e-51 205.7 167 63.5
Oeu059982.1 Olea europaea HOM05D004125 ORTHO05D004933 9.7e-51 205.3 447 35.3
Lsat_1_v5_gn_6_30280 Lactuca sativa HOM05D004125 ORTHO05D004933 1.3e-50 204.9 188 61.7
Nn2g10707 Nelumbo nucifera HOM05D004125 ORTHO05D004933 1.3e-50 204.9 440 33.9
Glyma.03G178800 Glycine max HOM05D004125 ORTHO05D004933 2.2e-50 204.1 440 34.8
Atru.chr8.1894 Acer truncatum HOM05D004125 ORTHO05D004933 6.3e-50 202.6 158 67.1
TWI74G1587 Tripterygium wilfordii HOM05D004125 ORTHO05D004933 6.3e-50 202.6 160 66.2
TAR636G1871 Trochodendron aralioides HOM05D004125 ORTHO05D004933 8.2e-50 202.2 449 34.5
TAR633G1040 Trochodendron aralioides HOM05D004125 ORTHO05D004933 1.1e-49 201.8 449 34.1
Cfa017522 Carpinus fangiana HOM05D004125 ORTHO05D004933 1.4e-49 201.4 439 33.9
Hma1.2p1_0111F.1_g054010 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 1.4e-49 201.4 441 35.4
Cc06_g03700 Coffea canephora HOM05D004125 ORTHO05D004933 2.4e-49 200.7 171 65.5
Nitab4.5_0006156g0040 Nicotiana tabacum HOM05D004125 ORTHO05D004933 5.3e-49 199.5 440 35.2
THA.LOC104823453 Tarenaya hassleriana HOM05D004125 ORTHO05D004933 7.0e-49 199.1 122 73.8
Aa31LG5G22400 Aethionema arabicum HOM05D004125 ORTHO05D004933 9.1e-49 198.7 159 65.4
DCAR_017716 Daucus carota HOM05D004125 ORTHO05D004933 9.1e-49 198.7 445 33.0
Lj3C980T5 Lonicera japonica HOM05D004125 ORTHO05D004933 9.1e-49 198.7 166 65.7
vmacro20050 Vaccinium macrocarpon HOM05D004125 ORTHO05D004933 9.1e-49 198.7 454 35.2
THA.LOC104806497 Tarenaya hassleriana HOM05D004125 ORTHO05D004933 1.2e-48 198.4 127 73.2
TAR623G1581 Trochodendron aralioides HOM05D004125 ORTHO05D004933 1.2e-48 198.4 163 62.0
Nitab4.5_0008568g0040 Nicotiana tabacum HOM05D004125 ORTHO05D004933 1.6e-48 198.0 166 60.8
Potri.016G087200 Populus trichocarpa HOM05D004125 ORTHO05D004933 1.6e-48 198.0 158 66.5
Nitab4.5_0003871g0020 Nicotiana tabacum HOM05D004125 ORTHO05D004933 2.0e-48 197.6 166 60.8
Phvul.001G175500 Phaseolus vulgaris HOM05D004125 ORTHO05D004933 2.0e-48 197.6 149 67.1
Sed0009991 Sechium edule HOM05D004125 ORTHO05D004933 2.0e-48 197.6 166 60.8
PGSC0003DMG400010481 Solanum tuberosum HOM05D004125 ORTHO05D004933 2.6e-48 197.2 174 59.8
MELO3C014254.2 Cucumis melo HOM05D004125 ORTHO05D004933 4.5e-48 196.4 449 32.7
Thhalv10017172m.g Eutrema salsugineum HOM05D004125 ORTHO05D004933 5.9e-48 196.1 159 63.5
Nitab4.5_0000669g0120 Nicotiana tabacum HOM05D004125 ORTHO05D004933 5.9e-48 196.1 444 34.9
Solyc10g084260.3 Solanum lycopersicum HOM05D004125 ORTHO05D004933 7.7e-48 195.7 174 59.2
Migut.J00424 Erythranthe guttata HOM05D004125 ORTHO05D004933 1.3e-47 194.9 164 65.2
Lj1g0007543 Lotus japonicus HOM05D004125 ORTHO05D004933 1.7e-47 194.5 438 32.4
Sopen10g033700 Solanum pennellii HOM05D004125 ORTHO05D004933 1.7e-47 194.5 174 59.2
PSO339G6461 Papaver somniferum HOM05D004125 ORTHO05D004933 2.2e-47 194.1 170 61.2
SalBow3G3732 Salvia bowleyana HOM05D004125 ORTHO05D004933 2.2e-47 194.1 446 33.6
arahy.Tifrunner.gnm1.ann1.DS9KFU Arachis hypogaea HOM05D004125 ORTHO05D004933 2.9e-47 193.7 119 75.6
arahy.Tifrunner.gnm1.ann1.SDZN59 Arachis hypogaea HOM05D004125 ORTHO05D004933 2.9e-47 193.7 119 75.6
Carub.0004s1900 Capsella rubella HOM05D004125 ORTHO05D004933 2.9e-47 193.7 159 62.9
AT2G37110 Arabidopsis thaliana HOM05D004125 ORTHO05D004933 3.8e-47 193.4 159 62.9
Atru.chr12.53 Acer truncatum HOM05D004125 ORTHO05D004933 5.0e-47 193.0 160 63.8
CARHR131620 Cardamine hirsuta HOM05D004125 ORTHO05D004933 5.0e-47 193.0 160 63.1
Duzib093G1540 Durio zibethinus HOM05D004125 ORTHO05D004933 5.0e-47 193.0 421 33.5
A03p20450 Brassica napus HOM05D004125 ORTHO05D004933 8.5e-47 192.2 159 62.3
BraA03t11288Z Brassica rapa HOM05D004125 ORTHO05D004933 1.1e-46 191.8 159 62.3
Peaxi162Scf00005g03811 Petunia axillaris HOM05D004125 ORTHO05D004933 1.1e-46 191.8 440 34.3
SEGI_21681 Sequoiadendron giganteum HOM05D004125 ORTHO05D004933 1.1e-46 191.8 122 72.1
Haze_20626 Corylus avellana HOM05D004125 ORTHO05D004933 1.9e-46 191.0 158 64.6
BcaC01g05633 Brassica carinata HOM05D004125 ORTHO05D004933 3.2e-46 190.3 162 63.6
BolC3t14795H Brassica oleracea HOM05D004125 ORTHO05D004933 3.2e-46 190.3 162 63.6
BcaB01g03789 Brassica carinata HOM05D004125 ORTHO05D004933 4.2e-46 189.9 159 61.6
C03p24050 Brassica napus HOM05D004125 ORTHO05D004933 4.2e-46 189.9 162 63.0
Peaxi162Scf00472g00039 Petunia axillaris HOM05D004125 ORTHO05D004933 5.5e-46 189.5 167 59.9
RhsimUnG0115400 Rhododendron simsii HOM05D004125 ORTHO05D004933 5.5e-46 189.5 191 55.5
Sed0002474 Sechium edule HOM05D004125 ORTHO05D004933 5.5e-46 189.5 174 60.3
AL4G33460 Arabidopsis lyrata HOM05D004125 ORTHO05D004933 7.2e-46 189.1 159 62.3
ECA233G4685 Erigeron canadensis HOM05D004125 ORTHO05D004933 9.4e-46 188.7 460 32.2
QL04p031281 Quercus lobata HOM05D004125 ORTHO05D004933 1.2e-45 188.3 181 58.6
QL07p045037 Quercus lobata HOM05D004125 ORTHO05D004933 1.2e-45 188.3 181 58.6
Sp4g19430 Schrenkiella parvula HOM05D004125 ORTHO05D004933 1.2e-45 188.3 159 61.6
HPP92_012053 Vanilla planifolia HOM05D004125 ORTHO05D004933 1.2e-45 188.3 159 59.7
CAN.G1091.11 Capsicum annuum HOM05D004125 ORTHO05D004933 2.7e-45 187.2 168 60.7
ClCG04G008880 Citrullus lanatus HOM05D004125 ORTHO05D004933 8.0e-45 185.7 162 61.1
BolC4t28068H Brassica oleracea HOM05D004125 ORTHO05D004933 1.4e-44 184.9 159 59.1
CDE07G0936 Ceratophyllum demersum HOM05D004125 ORTHO05D004933 1.4e-44 184.9 162 57.4
BcaB06g28978 Brassica carinata HOM05D004125 ORTHO05D004933 1.8e-44 184.5 159 58.5
A04p28380 Brassica napus HOM05D004125 ORTHO05D004933 2.3e-44 184.1 159 59.1
C04p65690 Brassica napus HOM05D004125 ORTHO05D004933 2.3e-44 184.1 159 59.1
RcHm_v2.0_Chr3g0469051 Rosa chinensis HOM05D004125 ORTHO05D004933 2.3e-44 184.1 164 64.0
MSTRG.19144 Avicennia marina HOM05D004125 ORTHO05D004933 3.0e-44 183.7 450 33.1
Aqoxy4G03230 Aquilegia oxysepala HOM05D004125 ORTHO05D004933 4.0e-44 183.3 179 56.4
MSTRG.5726 Avicennia marina HOM05D004125 ORTHO05D004933 4.0e-44 183.3 171 63.2
FAN05G0570 Fragaria x ananassa HOM05D004125 ORTHO05D004933 4.0e-44 183.3 167 62.9
Oeu001336.1 Olea europaea HOM05D004125 ORTHO05D004933 5.2e-44 183.0 169 59.8
FAN02G0333 Fragaria x ananassa HOM05D004125 ORTHO05D004933 6.8e-44 182.6 166 63.3
PSO384G3223 Papaver somniferum HOM05D004125 ORTHO05D004933 6.8e-44 182.6 167 59.9
BcaC02g07548 Brassica carinata HOM05D004125 ORTHO05D004933 8.8e-44 182.2 159 58.5
BraA04t18316Z Brassica rapa HOM05D004125 ORTHO05D004933 1.2e-43 181.8 159 58.5
Cfa017523 Carpinus fangiana HOM05D004125 ORTHO05D004933 3.4e-43 180.3 285 43.2
Ca_08833_v3 Cicer arietinum L. HOM05D004125 ORTHO05D004933 3.4e-43 180.3 116 71.6
CsaV3_6G039390 Cucumis sativus L. HOM05D004125 ORTHO05D004933 3.4e-43 180.3 396 32.1
Lalb_Chr20g0112841 Lupinus albus HOM05D004125 ORTHO05D004933 3.4e-43 180.3 427 31.4
Oeu014972.1 Olea europaea HOM05D004125 ORTHO05D004933 3.4e-43 180.3 173 59.5
TPR.G18284 Trifolium pratense HOM05D004125 ORTHO05D004933 5.7e-43 179.5 122 70.5
SGA_v2.0_scaffold126G33910 Striga asiatica HOM05D004125 ORTHO05D004933 7.5e-43 179.1 172 60.5
FAN09G3242 Fragaria x ananassa HOM05D004125 ORTHO05D004933 9.8e-43 178.7 166 62.0
FAN14G3382 Fragaria x ananassa HOM05D004125 ORTHO05D004933 1.3e-42 178.3 170 59.4
CAN.G915.16 Capsicum annuum HOM05D004125 ORTHO05D004933 2.2e-42 177.6 120 66.7
CDE04G0632 Ceratophyllum demersum HOM05D004125 ORTHO05D004933 2.8e-42 177.2 162 56.8
FvH4_6g15540 Fragaria vesca HOM05D004125 ORTHO05D004933 2.8e-42 177.2 164 62.2
SalBow5G2572 Salvia bowleyana HOM05D004125 ORTHO05D004933 2.8e-42 177.2 401 32.2
Medtr7g100870 Medicago truncatula HOM05D004125 ORTHO05D004933 4.8e-42 176.4 413 32.0
SalBow5G1492 Salvia bowleyana HOM05D004125 ORTHO05D004933 2.4e-41 174.1 401 31.9
EL10Ac7g16513 Beta vulgaris HOM05D004125 ORTHO05D004933 3.1e-41 173.7 459 31.6
Eucgr.A01169 Eucalyptus grandis HOM05D004125 ORTHO05D004933 3.1e-41 173.7 176 55.1
Actinidia05264 Actinidia chinensis HOM05D004125 ORTHO05D004933 5.4e-41 172.9 374 32.6
Gohir.A11G324600 Gossypium hirsutum HOM05D004125 ORTHO05D004933 1.6e-40 171.4 162 56.8
Migut.L01669 Erythranthe guttata HOM05D004125 ORTHO05D004933 5.9e-40 169.5 153 58.8
PGR142G2082 Punica granatum HOM05D004125 ORTHO05D004933 1.7e-39 167.9 170 57.1
SGA_v2.0_scaffold94G28676 Striga asiatica HOM05D004125 ORTHO05D004933 4.2e-38 163.3 149 55.7
PSO063G5409 Papaver somniferum HOM05D004125 ORTHO05D004933 7.2e-38 162.5 149 54.4
Ah.15g092190 Amaranthus hybridus HOM05D004125 ORTHO05D004933 9.4e-38 162.2 161 57.1
SalBow5G0726 Salvia bowleyana HOM05D004125 ORTHO05D004933 2.1e-37 161.0 123 63.4
Sc07g0006290 Simmondsia chinensis HOM05D004125 ORTHO05D004933 2.7e-37 160.6 171 52.6
DCAR_014971 Daucus carota HOM05D004125 ORTHO05D004933 2.3e-36 157.5 443 30.2
Zm00001eb123690 Zea mays HOM05D004125 ORTHO05D004933 1.2e-35 155.2 172 49.4
Os01g0157900 Oryza sativa ssp. japonica HOM05D004125 ORTHO05D004933 4.4e-35 153.3 114 62.3
Psat0s1011g0040 Pisum sativum HOM05D004125 ORTHO05D004933 1.3e-34 151.8 381 30.7
AUR62040494 Chenopodium quinoa HOM05D004125 ORTHO05D004933 2.8e-34 150.6 136 58.1
Gorai.007G374200 Gossypium raimondii HOM05D004125 ORTHO05D004933 1.4e-33 148.3 97 69.1
unitig_0.g689 Utricularia gibba HOM05D004125 ORTHO05D004933 9.5e-30 135.6 141 49.6
AagrBONN_evm.TU.Sc2ySwM_369.209 Anthoceros agrestis HOM05D004125 ORTHO05D004933 8.3e-26 122.5 156 44.9
Mapoly0052s0073 Marchantia polymorpha HOM05D004125 ORTHO05D004933 4.1e-25 120.2 165 42.4
Gohir.D11G343850 Gossypium hirsutum HOM05D004125 ORTHO05D004933 1.6e-24 118.2 77 68.8
Pp3c2_28280 Physcomitrium patens HOM05D004125 ORTHO05D004933 7.8e-24 115.9 114 50.9
Pp3c19_5790 Physcomitrium patens HOM05D004125 ORTHO05D004933 3.3e-22 110.5 113 50.4
PSO339G6532 Papaver somniferum HOM05D004125 ORTHO05D004933 1.0e-20 105.5 77 62.3
Hma1.2p1_0614F.1_g189590 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 1.4e-17 95.1 61 68.9
Hma1.2p1_0614F.1_g189605 Hydrangea macrophylla HOM05D004125 ORTHO05D004933 1.4e-17 95.1 61 68.9
Pp3c21_3760 Physcomitrium patens HOM05D004125 ORTHO05D004933 2.4e-17 94.4 112 43.8
ATR0594G238 Amborella trichopoda HOM05D004125 ORTHO05D004933 7.8e-16 89.4 95 50.5
MBI15_g00075_MAGBIO Magnolia biondii HOM05D004125 ORTHO05D004933 1.3e-15 88.6 109 49.5
arahy.Tifrunner.gnm1.ann1.05RLXM Arachis hypogaea HOM05D004125 ORTHO05D004933 1.7e-15 88.2 82 51.2
arahy.Tifrunner.gnm1.ann1.X8Y7H8 Arachis hypogaea HOM05D004125 ORTHO05D004933 2.3e-15 87.8 58 65.5
QL07p045063 Quercus lobata HOM05D004125 ORTHO05D004933 6.2e-13 79.7 97 50.5
Lj2A109G39 Lonicera japonica HOM05D004125 ORTHO05D004933 4.0e-12 77.0 38 89.5
RhsimUnG0115500 Rhododendron simsii HOM05D004125 ORTHO05D004933 1.6e-08 65.1 93 37.6


User provided reference genes

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