Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.7e-35 152.1 76 100.0
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 7.3e-23 110.2 58 94.8
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.6e-22 109.0 58 93.1
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.1e-22 108.6 58 91.4
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.7e-22 107.5 56 96.4
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.1e-21 106.3 58 91.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.1e-21 106.3 58 89.7
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.4e-21 105.9 58 89.7
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 1.4e-21 105.9 71 77.5
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.8e-21 105.5 58 87.9
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.8e-21 105.5 58 87.9
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.8e-21 105.5 56 92.9
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.3e-21 105.1 58 89.7
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.3e-21 105.1 71 77.5
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 2.3e-21 105.1 58 89.7
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.3e-21 105.1 58 89.7
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 4.0e-21 104.4 58 86.2
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 4.0e-21 104.4 58 87.9
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 4.0e-21 104.4 58 87.9
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 4.0e-21 104.4 58 87.9
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 4.0e-21 104.4 58 89.7
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 5.2e-21 104.0 58 87.9
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 5.2e-21 104.0 58 87.9
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 5.2e-21 104.0 58 87.9
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 8.9e-21 103.2 58 87.9
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 8.9e-21 103.2 58 86.2
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 8.9e-21 103.2 58 84.5
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 8.9e-21 103.2 58 87.9
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 8.9e-21 103.2 58 86.2
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.2e-20 102.8 58 84.5
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.2e-20 102.8 58 86.2
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.5e-20 102.4 58 86.2
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.5e-20 102.4 58 87.9
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.5e-20 102.4 58 84.5
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 2.0e-20 102.1 58 86.2
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.0e-20 102.1 56 91.1
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.0e-20 102.1 56 91.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.0e-20 102.1 58 86.2
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 2.0e-20 102.1 58 86.2
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.0e-20 102.1 58 86.2
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.6e-20 101.7 56 87.5
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 2.6e-20 101.7 56 87.5
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 2.6e-20 101.7 56 87.5
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.6e-20 101.7 56 87.5
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 2.6e-20 101.7 56 87.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 2.6e-20 101.7 58 86.2
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 2.6e-20 101.7 58 84.5
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 3.4e-20 101.3 58 84.5
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 4.4e-20 100.9 71 71.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 4.4e-20 100.9 58 84.5
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 5.8e-20 100.5 56 89.3
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 5.8e-20 100.5 58 84.5
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 7.5e-20 100.1 56 87.5
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 7.5e-20 100.1 58 82.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 7.5e-20 100.1 58 86.2
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 7.5e-20 100.1 58 84.5
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 7.5e-20 100.1 58 82.8
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 9.9e-20 99.8 58 84.5
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 9.9e-20 99.8 58 86.2
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 9.9e-20 99.8 58 86.2
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.7e-19 99.0 56 85.7
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.7e-19 99.0 58 82.8
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.7e-19 99.0 56 89.3
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.7e-19 99.0 56 89.3
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.7e-19 99.0 58 82.8
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.7e-19 99.0 56 83.9
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 1.7e-19 99.0 58 81.0
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.2e-19 98.6 56 85.7
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.2e-19 98.6 58 84.5
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 2.2e-19 98.6 56 89.3
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.2e-19 98.6 58 84.5
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 2.2e-19 98.6 58 81.0
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 2.9e-19 98.2 56 87.5
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 2.9e-19 98.2 58 82.8
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 3.7e-19 97.8 56 85.7
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 3.7e-19 97.8 56 85.7
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 3.7e-19 97.8 58 82.8
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 6.4e-19 97.1 56 83.9
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.4e-18 95.9 58 77.6
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.4e-18 95.9 58 81.0
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.9e-18 95.5 56 83.9
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 7.1e-18 93.6 56 82.1
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 1.2e-17 92.8 58 77.6
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.6e-17 92.4 58 75.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 6.0e-17 90.5 81 61.7
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 1.0e-16 89.7 56 75.0
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 3.0e-16 88.2 58 72.4
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.9e-15 85.5 58 67.2
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 4.3e-15 84.3 62 74.2
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 4.0e-13 77.8 58 72.4
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 4.0e-13 77.8 56 73.2
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 4.4e-12 74.3 55 63.6
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 4.9e-11 70.9 42 78.6
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.0e-08 63.2 31 96.8
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 3.9e-08 61.2 31 90.3
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 8.7e-08 60.1 44 68.2
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.5e-07 58.5 31 83.9


User provided reference genes

Program Settings