Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0137500 Rhododendron simsii HOM05D007742 ORTHO05D010160 2.4e-187 658.7 337 100.0
Rhsim08G0038200 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.7e-71 273.9 211 72.0
vmacro18397 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 3.9e-52 209.5 206 56.8
Actinidia37712 Actinidia chinensis HOM05D007742 ORTHO05D004072 1.9e-38 164.1 204 49.5
CSS0018935 Camellia sinensis var. sinensis HOM05D007742 ORTHO05D004072 1.3e-26 124.8 203 41.9
Rhsim13G0215200 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.5e-22 111.3 104 61.5
CSS0036601 Camellia sinensis var. sinensis HOM05D007742 ORTHO05D004072 1.9e-22 110.9 190 38.9
vmacro18395 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 1.9e-22 110.9 112 57.1
Hma1.2p1_0868F.1_g230420 Hydrangea macrophylla HOM05D007742 ORTHO05D004072 5.5e-22 109.4 218 36.2
Lj7A618T68 Lonicera japonica HOM05D007742 ORTHO05D004072 1.8e-20 104.4 212 33.5
Rhsim13G0215300 Rhododendron simsii HOM05D001192 ORTHO05D010160 4.0e-20 103.2 106 56.6
Dinv33270 Davidia involucrata HOM05D007742 ORTHO05D004072 1.1e-17 95.1 161 36.0
Rhsim13G0215400 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.6e-16 91.3 102 53.9
QL02p069122 Quercus lobata HOM05D007742 ORTHO05D004072 1.9e-14 84.3 217 32.3
Rhsim13G0214500 Rhododendron simsii HOM05D001192 ORTHO05D010160 9.4e-14 82.0 110 44.5
QL02p069032 Quercus lobata HOM05D007742 ORTHO05D004072 1.6e-13 81.3 219 33.3
Haze_14967 Corylus avellana HOM05D007742 ORTHO05D004072 2.1e-13 80.9 213 32.9
Prupe.3G314400 Prunus persica HOM05D007742 ORTHO05D004072 2.1e-13 80.9 213 29.6
Rhsim13G0213900 Rhododendron simsii HOM05D001192 ORTHO05D010160 2.1e-13 80.9 112 47.3
CiPaw.15G155500 Carya illinoinensis HOM05D007742 ORTHO05D004072 3.6e-13 80.1 158 35.4
Duzib138G0881 Durio zibethinus HOM05D007742 ORTHO05D004072 6.1e-13 79.3 220 29.5
Rhsim13G0214600 Rhododendron simsii HOM05D001192 ORTHO05D010160 6.1e-13 79.3 113 43.4
Rhsim13G0214400 Rhododendron simsii HOM05D001192 ORTHO05D010160 8.0e-13 79.0 113 43.4
Rhsim13G0214700 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.4e-12 78.2 113 42.5
QL02p068827 Quercus lobata HOM05D007742 ORTHO05D004072 2.3e-12 77.4 213 30.0
Rhsim13G0213300 Rhododendron simsii HOM05D001192 ORTHO05D010160 5.2e-12 76.3 111 45.9
Rhsim13G0214200 Rhododendron simsii HOM05D001192 ORTHO05D010160 2.0e-11 74.3 110 44.5
Rhsim13G0215100 Rhododendron simsii HOM05D001192 ORTHO05D010160 2.0e-11 74.3 115 42.6
PGSC0003DMG400020234 Solanum tuberosum HOM05D007742 ORTHO05D004072 2.0e-11 74.3 166 31.3
Cfa007153 Carpinus fangiana HOM05D007742 ORTHO05D004072 2.6e-11 73.9 219 30.1
Rhsim13G0214900 Rhododendron simsii HOM05D001192 ORTHO05D010160 3.4e-11 73.6 111 43.2
Rhsim13G0215600 Rhododendron simsii HOM05D001192 ORTHO05D010160 4.4e-11 73.2 109 45.0
Rhsim13G0215700 Rhododendron simsii HOM05D001192 ORTHO05D010160 7.5e-11 72.4 112 43.8
Rhsim13G0214000 Rhododendron simsii HOM05D001192 ORTHO05D010160 2.8e-10 70.5 111 43.2
Rhsim13G0214100 Rhododendron simsii HOM05D001192 ORTHO05D010160 1.8e-09 67.8 120 40.8
Peaxi162Scf00420g00831 Petunia axillaris HOM05D007742 ORTHO05D004072 3.1e-09 67.0 173 30.1
Rhsim13G0213600 Rhododendron simsii HOM05D001192 ORTHO05D010160 3.1e-09 67.0 92 48.9
Rhsim13G0113100 Rhododendron simsii HOM05D001192 ORTHO05D010160 4.1e-09 66.6 114 42.1
Sc16g0003130 Simmondsia chinensis HOM05D007742 ORTHO05D004072 4.1e-09 66.6 133 33.1
Atru.chr6.2712 Acer truncatum HOM05D007742 ORTHO05D004072 5.4e-09 66.2 222 26.6
QL02p069084 Quercus lobata HOM05D007742 ORTHO05D004072 7.0e-09 65.9 153 32.0
Manes.04G094400 Manihot esculenta HOM05D007742 ORTHO05D004072 7.7e-08 62.4 228 26.3
Potri.009G112676 Populus trichocarpa HOM05D007742 ORTHO05D004072 1.7e-07 61.2 173 27.7
Potri.T125604 Populus trichocarpa HOM05D007742 ORTHO05D004072 1.7e-07 61.2 173 27.7
QL09p009056 Quercus lobata HOM05D004225 ORTHO05D004728 2.5e-06 57.4 215 28.8
Rhsim13G0213500 Rhododendron simsii HOM05D001192 ORTHO05D010160 2.5e-06 57.4 127 36.2
Lj1g0006134 Lotus japonicus HOM05D007742 ORTHO05D004072 5.5e-06 56.2 204 28.4
QL06p043010 Quercus lobata HOM05D000529 ORTHO05D000472 9.5e-06 55.5 139 31.7


User provided reference genes

Program Settings