Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 1.7e-64 249.2 127 100.0
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 2.8e-27 125.6 129 60.5
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 2.8e-27 125.6 118 55.9
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 2.6e-25 119.0 122 62.3
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 3.4e-25 118.6 119 59.7
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 1.9e-23 112.8 121 59.5
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 7.1e-23 110.9 110 58.2
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 3.5e-22 108.6 123 52.0
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 7.9e-22 107.5 121 56.2
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 2.3e-21 105.9 120 55.0
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 5.7e-20 101.3 120 53.3
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 7.4e-20 100.9 126 50.8
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.6e-19 99.8 118 54.2
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 2.2e-19 99.4 131 51.1
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 3.7e-19 98.6 120 50.8
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 4.8e-19 98.2 123 53.7
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 6.3e-19 97.8 131 51.9
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 6.3e-19 97.8 113 53.1
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.1e-18 97.1 122 50.8
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.1e-18 97.1 124 50.8
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 2.4e-18 95.9 112 55.4
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 5.3e-18 94.7 117 48.7
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.2e-17 93.6 119 47.1
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 2.0e-17 92.8 117 47.9
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 2.6e-17 92.4 115 53.0
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 7.6e-17 90.9 120 49.2
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 7.6e-17 90.9 127 48.8
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 7.6e-17 90.9 135 45.9
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 7.6e-17 90.9 135 45.9
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 1.0e-16 90.5 116 49.1
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 1.0e-16 90.5 113 54.0
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.3e-16 90.1 119 48.7
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.7e-16 89.7 135 45.2
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.7e-16 89.7 135 45.2
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 1.7e-16 89.7 135 45.9
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.9e-16 89.0 135 45.2
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 2.9e-16 89.0 118 45.8
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 3.8e-16 88.6 127 46.5
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 5.0e-16 88.2 136 44.9
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 5.0e-16 88.2 131 46.6
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 6.5e-16 87.8 111 53.2
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 1.4e-15 86.7 116 46.6
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.9e-15 86.3 119 46.2
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 1.9e-15 86.3 128 44.5
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 3.2e-15 85.5 119 45.4
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 4.2e-15 85.1 115 44.3
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 4.2e-15 85.1 74 66.2
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 9.4e-15 84.0 114 47.4
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 1.2e-14 83.6 117 51.3
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.6e-14 83.2 124 46.0
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 2.7e-14 82.4 80 58.8
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 2.7e-14 82.4 112 44.6
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 2.7e-14 82.4 69 65.2
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 3.6e-14 82.0 136 39.0
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 4.6e-14 81.6 121 47.9
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 6.1e-14 81.3 126 44.4
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 7.9e-14 80.9 109 47.7
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 1.0e-13 80.5 122 47.5
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 1.0e-13 80.5 117 45.3
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 1.4e-13 80.1 125 46.4
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.8e-13 79.7 127 43.3
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 2.3e-13 79.3 114 50.9
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 3.0e-13 79.0 75 61.3
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 3.0e-13 79.0 138 40.6
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 3.9e-13 78.6 116 48.3
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 3.9e-13 78.6 133 42.9
Nitab4.5_0000721g0120 Nicotiana tabacum HOM05D005113 ORTHO05D006045 3.9e-13 78.6 114 49.1
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 5.1e-13 78.2 119 47.1
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 6.7e-13 77.8 69 66.7
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 6.7e-13 77.8 73 61.6
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 8.8e-13 77.4 121 45.5
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 1.1e-12 77.0 130 40.8
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 1.5e-12 76.6 83 54.2
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 1.5e-12 76.6 84 58.3
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 1.9e-12 76.3 69 65.2
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 2.5e-12 75.9 125 44.0
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 2.5e-12 75.9 125 44.0
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 3.3e-12 75.5 83 53.0
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 4.3e-12 75.1 133 41.4
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 9.7e-12 73.9 85 55.3
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 9.7e-12 73.9 136 39.0
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 9.7e-12 73.9 116 44.8
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 1.7e-11 73.2 121 44.6
COL.COLO4_29500 Corchorus olitorius HOM05D005113 ORTHO05D006045 2.2e-11 72.8 111 44.1
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 2.8e-11 72.4 83 53.0
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 2.8e-11 72.4 72 58.3
arahy.Tifrunner.gnm1.ann1.HSX17H Arachis hypogaea HOM05D005113 ORTHO05D006045 3.7e-11 72.0 115 40.9
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 4.8e-11 71.6 117 47.9
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 6.3e-11 71.2 72 58.3
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 6.3e-11 71.2 72 58.3
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 6.3e-11 71.2 72 58.3
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 6.3e-11 71.2 72 58.3
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 6.3e-11 71.2 72 58.3
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 6.3e-11 71.2 72 58.3
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 6.3e-11 71.2 111 45.9
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 6.3e-11 71.2 70 62.9
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 8.2e-11 70.9 118 45.8
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 8.2e-11 70.9 78 53.8
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 8.2e-11 70.9 72 56.9
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.4e-10 70.1 72 58.3
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 1.8e-10 69.7 88 51.1
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.8e-10 69.7 110 40.0
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 3.1e-10 68.9 72 56.9
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 4.1e-10 68.6 132 35.6
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 5.3e-10 68.2 73 56.2
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 5.3e-10 68.2 73 56.2
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 9.1e-10 67.4 72 54.2
arahy.Tifrunner.gnm1.ann1.I8YMJK Arachis hypogaea HOM05D005113 ORTHO05D006045 1.5e-09 66.6 126 37.3
BcaC07g39601 Brassica carinata HOM05D005113 ORTHO05D006045 1.5e-09 66.6 73 56.2
C08p27550 Brassica napus HOM05D005113 ORTHO05D006045 1.5e-09 66.6 73 56.2
BolC8t50376H Brassica oleracea HOM05D005113 ORTHO05D006045 1.5e-09 66.6 73 56.2
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 3.4e-09 65.5 119 34.5
Glyma.10G086500 Glycine max HOM05D005113 ORTHO05D006045 3.4e-09 65.5 119 37.0
PGR004G1479 Punica granatum HOM05D005113 ORTHO05D006045 7.7e-09 64.3 159 34.0
CDE07G0213 Ceratophyllum demersum HOM05D005113 ORTHO05D006045 1.7e-08 63.2 123 36.6
AL4G31960 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 5.0e-08 61.6 78 53.8
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 6.5e-08 61.2 99 44.4
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 6.5e-08 61.2 132 33.3
CARHR130110 Cardamine hirsuta HOM05D005113 ORTHO05D006045 8.5e-08 60.8 67 53.7
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 8.5e-08 60.8 78 51.3
Carub.0004s1761 Capsella rubella HOM05D005113 ORTHO05D006045 3.2e-07 58.9 65 56.9
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 3.2e-07 58.9 99 42.4
Phvul.007G265600 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 3.2e-07 58.9 119 36.1
A04p27340 Brassica napus HOM05D005113 ORTHO05D006045 4.2e-07 58.5 73 52.1
BcaB01g03875 Brassica carinata HOM05D005113 ORTHO05D006045 7.2e-07 57.8 79 51.9
VMungo0720G0986 Vigna mungo HOM05D005113 ORTHO05D006045 7.2e-07 57.8 115 37.4
AT2G35850 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 9.4e-07 57.4 77 51.9
BraA04t18232Z Brassica rapa HOM05D005113 ORTHO05D006045 1.6e-06 56.6 73 50.7
BcaB06g28884 Brassica carinata HOM05D005113 ORTHO05D006045 2.7e-06 55.8 82 51.2
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 4.7e-06 55.1 95 42.1
HPP92_012153 Vanilla planifolia HOM05D005113 ORTHO05D006045 6.1e-06 54.7 78 47.4


User provided reference genes

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