Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0133500 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.8e-166 588.6 301 100.0
PSO210G3997 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-29 134.4 249 39.0
CSS0048486 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-29 132.5 257 38.9
Hma1.2p1_0033F.1_g020960 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-25 121.3 285 35.4
SEGI_21402 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.8e-25 120.2 318 32.1
Hma1.2p1_1591F.1_g292490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.1e-25 118.6 398 29.9
arahy.Tifrunner.gnm1.ann1.Z24LQA Arachis hypogaea HOM05D000002 ORTHO05D000047 9.0e-24 115.2 298 34.6
arahy.Tifrunner.gnm1.ann1.3LWB0T Arachis hypogaea HOM05D000002 ORTHO05D000047 3.4e-23 113.2 295 34.9
CSS0020833 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-22 109.4 247 37.2
Hma1.2p1_0253F.1_g102890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.4e-22 109.0 355 33.0
SEGI_27781 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-21 107.8 295 33.2
PSO675G8013 Papaver somniferum HOM05D000002 ORTHO05D000047 1.6e-20 104.4 75 62.7
Sabra08G0045900 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-20 104.0 77 64.9
Sabra16G0314700 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-20 104.0 77 64.9
Sabra17G0041500 Salix brachista HOM05D000002 ORTHO05D000047 2.1e-20 104.0 77 64.9
CANSAT78G0804 Cannabis sativa HOM05D000002 ORTHO05D000047 4.6e-20 102.8 75 66.7
SEGI_08785 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.6e-20 102.8 103 56.3
Sabra09G0110300 Salix brachista HOM05D000002 ORTHO05D000047 6.0e-20 102.4 77 63.6
Hma1.2p1_0348F.1_g131690 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-19 100.9 347 31.7
Hma1.2p1_0802F.1_g220420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-19 100.9 75 66.7
Hma1.2p1_0915F.1_g236310 Hydrangea macrophylla HOM05D001900 ORTHO05D009822 2.3e-19 100.5 75 64.0
QL05p076832 Quercus lobata HOM05D000002 ORTHO05D000001 3.9e-19 99.8 77 59.7
TWI12G0032 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.9e-19 99.8 75 62.7
Atru.chr13.1089 Acer truncatum HOM05D000002 ORTHO05D000047 1.5e-18 97.8 77 61.0
arahy.Tifrunner.gnm1.ann1.U3X8MH Arachis hypogaea HOM05D000002 ORTHO05D000047 1.5e-18 97.8 75 64.0
Hma1.2p1_0281F.1_g113200 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-18 97.1 75 60.0
TAR406G0010 Trochodendron aralioides HOM05D000002 ORTHO05D000047 2.5e-18 97.1 75 60.0
TAR570G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000047 3.3e-18 96.7 75 60.0
Rhsim07G0041000 Rhododendron simsii HOM05D000432 ORTHO05D000320 5.6e-18 95.9 75 60.0
Sabra16G0313700 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-18 95.9 75 60.0
Sabra19G0016100 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-18 95.9 75 60.0
Sabra19G0019600 Salix brachista HOM05D000002 ORTHO05D000047 5.6e-18 95.9 75 60.0
Hma1.2p1_0017F.1_g011450 Hydrangea macrophylla HOM05D000149 ORTHO05D000047 7.4e-18 95.5 76 57.9
QL03p016803 Quercus lobata HOM05D000002 ORTHO05D000047 7.4e-18 95.5 77 59.7
Sabra15G0060700 Salix brachista HOM05D000002 ORTHO05D000047 2.8e-17 93.6 75 58.7
Hma1.2p1_0292F.1_g115520 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-17 93.2 67 67.2
CSS0046833 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 8.1e-17 92.0 77 57.1
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 4.0e-16 89.7 186 37.6
Sabra05G0034800 Salix brachista HOM05D000002 ORTHO05D000047 5.3e-16 89.4 75 56.0
Sabra09G0051700 Salix brachista HOM05D000002 ORTHO05D000047 5.3e-16 89.4 75 56.0
Sabra10G0088600 Salix brachista HOM05D000002 ORTHO05D000047 5.3e-16 89.4 75 56.0
Sabra11G0023800 Salix brachista HOM05D000002 ORTHO05D000047 5.3e-16 89.4 75 56.0
Sabra09G0024400 Salix brachista HOM05D000002 ORTHO05D000047 5.8e-15 85.9 60 70.0
arahy.Tifrunner.gnm1.ann1.P3W6IN Arachis hypogaea HOM05D000002 ORTHO05D000047 1.3e-14 84.7 339 29.2
Sabra11G0091400 Salix brachista HOM05D000002 ORTHO05D000047 4.9e-14 82.8 75 52.0
CSS0014458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-13 80.5 268 28.4
Sabra12G0039500 Salix brachista HOM05D000002 ORTHO05D000047 4.2e-13 79.7 63 65.1
SEGI_01318 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.5e-13 79.3 127 44.1
CSS0002046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.5e-12 76.6 257 28.0
CSS0017142 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.0e-11 75.1 257 27.6
SEGI_08695 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.3e-11 74.7 69 65.2
CSS0020126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.9e-10 70.9 81 46.9
Sabra01G0099600 Salix brachista HOM05D000002 ORTHO05D000047 1.9e-10 70.9 67 46.3
Atru.chr3.2232 Acer truncatum HOM05D000002 ORTHO05D000001 2.5e-10 70.5 76 42.1
RcHm_v2.0_Chr3g0450981 Rosa chinensis HOM05D000002 ORTHO05D000047 1.3e-09 68.2 64 46.9
RcHm_v2.0_Chr3g0460001 Rosa chinensis HOM05D000002 ORTHO05D000047 1.3e-09 68.2 64 46.9
SHI05385 Sapria himalayana HOM05D000002 ORTHO05D000047 1.3e-09 68.2 58 60.3
CSS0038553 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-09 66.2 46 67.4
Sabra16G0006500 Salix brachista HOM05D000002 ORTHO05D000047 8.2e-09 65.5 78 37.2
TWI60G0096 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 8.2e-09 65.5 84 39.3
TWI63G0021 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 8.2e-09 65.5 84 39.3
Sabra04G0151400 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra05G0049300 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra10G0054700 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra11G0110600 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra16G0096900 Salix brachista HOM05D000046 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra17G0026400 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-08 65.1 78 37.2
Sabra18G0042000 Salix brachista HOM05D000002 ORTHO05D000047 1.1e-08 65.1 78 37.2
Oeu007248.1 Olea europaea HOM05D000002 ORTHO05D000001 1.8e-08 64.3 86 47.7
Sabra05G0005000 Salix brachista HOM05D000002 ORTHO05D000047 2.4e-08 63.9 79 36.7
Sabra16G0275300 Salix brachista HOM05D000002 ORTHO05D000047 2.4e-08 63.9 79 36.7
ECA238G4452 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.0e-08 63.2 64 42.2
FvH4_4g33921 Fragaria vesca HOM05D000002 ORTHO05D000047 4.0e-08 63.2 73 38.4
Manes.16G046469 Manihot esculenta HOM05D000002 ORTHO05D000047 4.0e-08 63.2 75 38.7
SHI27737 Sapria himalayana HOM05D000002 ORTHO05D000047 4.0e-08 63.2 62 62.9
FvH4_1g25961 Fragaria vesca HOM05D000002 ORTHO05D000047 5.3e-08 62.8 73 38.4
PSO384G2910 Papaver somniferum HOM05D000002 ORTHO05D000001 5.3e-08 62.8 66 59.1
PSO339G3906 Papaver somniferum HOM05D000002 ORTHO05D000047 1.2e-07 61.6 48 58.3
PSO013G0136 Papaver somniferum HOM05D000002 ORTHO05D000047 1.5e-07 61.2 81 29.6
Sabra15G0065500 Salix brachista HOM05D000372 ORTHO05D000948 2.0e-07 60.8 75 37.3
COL.COLO4_23681 Corchorus olitorius HOM05D000002 ORTHO05D000047 2.6e-07 60.5 75 45.3
Manes.10G076601 Manihot esculenta HOM05D000002 ORTHO05D000047 2.6e-07 60.5 64 40.6
Hma1.2p1_1108F.1_g257720 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.4e-07 60.1 78 34.6
MD02G1250500 Malus domestica HOM05D000002 ORTHO05D000001 4.5e-07 59.7 88 44.3
RcHm_v2.0_Chr1g0341931 Rosa chinensis HOM05D000002 ORTHO05D000047 4.5e-07 59.7 74 39.2
Manes.03G152001 Manihot esculenta HOM05D000002 ORTHO05D000047 1.0e-06 58.5 64 40.6
Potri.013G016350 Populus trichocarpa HOM05D000002 ORTHO05D000047 1.0e-06 58.5 79 35.4
RcHm_v2.0_Chr5g0078371 Rosa chinensis HOM05D000002 ORTHO05D000001 1.3e-06 58.2 66 54.5
RcHm_v2.0_Chr6g0303211 Rosa chinensis HOM05D000002 ORTHO05D000001 1.3e-06 58.2 66 54.5
Sabra06G0157700 Salix brachista HOM05D000002 ORTHO05D000047 1.3e-06 58.2 75 36.0
Manes.05G004600 Manihot esculenta HOM05D000002 ORTHO05D000047 1.7e-06 57.8 60 43.3
PSO782G4628 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-06 57.0 73 31.5
Oeu021690.1 Olea europaea HOM05D000002 ORTHO05D000001 3.8e-06 56.6 57 57.9
RcHm_v2.0_Chr4g0404531 Rosa chinensis HOM05D000002 ORTHO05D000001 3.8e-06 56.6 66 53.0
RcHm_v2.0_Chr5g0081101 Rosa chinensis HOM05D000002 ORTHO05D000001 3.8e-06 56.6 66 53.0
COL.COLO4_20968 Corchorus olitorius HOM05D000002 ORTHO05D000047 4.9e-06 56.2 42 61.9
Ah.10g032180 Amaranthus hybridus HOM05D000002 ORTHO05D000047 6.5e-06 55.8 77 35.1
RcHm_v2.0_Chr6g0298961 Rosa chinensis HOM05D000002 ORTHO05D000001 6.5e-06 55.8 66 56.1


User provided reference genes

Program Settings