Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0129600 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.5e-56 221.9 110 100.0
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 2.8e-39 165.2 137 65.7
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 6.8e-38 160.6 106 76.4
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 9.8e-37 156.8 99 77.8
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 6.0e-34 147.5 99 71.7
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 1.0e-33 146.7 99 69.7
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 1.3e-33 146.4 99 71.7
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 2.3e-33 145.6 99 70.7
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 2.3e-33 145.6 99 68.7
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 8.6e-33 143.7 99 70.7
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.1e-32 143.3 99 69.7
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.9e-32 142.5 99 69.7
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 4.3e-32 141.4 99 66.7
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 9.5e-32 140.2 99 67.7
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 2.8e-31 138.7 99 69.7
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 2.8e-31 138.7 99 65.7
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 3.6e-31 138.3 99 67.7
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 4.7e-31 137.9 99 65.7
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 6.2e-31 137.5 99 67.7
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 1.1e-30 136.7 99 65.7
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 1.4e-30 136.3 99 64.6
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 2.3e-30 135.6 99 66.7
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 3.1e-30 135.2 99 64.6
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 3.1e-30 135.2 99 64.6
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 3.1e-30 135.2 99 63.6
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 4.0e-30 134.8 99 64.6
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 4.0e-30 134.8 99 64.6
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 5.2e-30 134.4 99 61.6
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 5.2e-30 134.4 99 64.6
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 5.2e-30 134.4 99 62.6
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 8.9e-30 133.7 99 66.7
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.2e-29 133.3 99 63.6
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.2e-29 133.3 99 63.6
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 1.5e-29 132.9 99 66.7
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 2.0e-29 132.5 99 64.6
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.4e-29 131.7 99 63.6
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 3.4e-29 131.7 99 63.6
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 3.4e-29 131.7 99 59.6
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 3.4e-29 131.7 99 64.6
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 4.4e-29 131.3 100 63.0
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 7.5e-29 130.6 99 62.6
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 1.7e-28 129.4 99 64.6
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.7e-28 129.4 99 61.6
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 2.2e-28 129.0 99 62.6
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 1.4e-27 126.3 100 60.0
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.9e-27 125.9 99 60.6
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 4.1e-27 124.8 99 60.6
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 5.4e-27 124.4 99 59.6
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 5.4e-27 124.4 99 59.6
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 1.2e-26 123.2 99 61.6
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.6e-26 122.9 99 61.6
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 3.5e-26 121.7 100 61.0
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 3.5e-26 121.7 99 56.6
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 6.0e-26 120.9 99 57.6
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 6.0e-26 120.9 99 55.6
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 1.3e-25 119.8 99 57.6
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 1.7e-25 119.4 99 54.5
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 3.0e-25 118.6 99 55.6
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 3.9e-25 118.2 99 54.5
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 5.1e-25 117.9 99 54.5
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 5.1e-25 117.9 99 54.5
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 5.1e-25 117.9 99 58.6
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 1.1e-24 116.7 99 53.5
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 1.9e-24 115.9 99 52.5
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 9.5e-24 113.6 99 52.5
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 9.5e-24 113.6 99 52.5
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 9.5e-24 113.6 99 52.5
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 1.2e-23 113.2 99 52.5
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 1.2e-23 113.2 99 52.5
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 2.1e-23 112.5 99 54.5
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 2.1e-23 112.5 81 66.7
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 2.8e-23 112.1 99 50.5
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 4.7e-23 111.3 99 55.6
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 6.2e-23 110.9 99 54.5
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 8.1e-23 110.5 99 53.5
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 8.1e-23 110.5 99 54.5
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 1.1e-22 110.2 99 50.5
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 1.4e-22 109.8 99 49.5
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 1.4e-22 109.8 99 56.6
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 1.4e-22 109.8 99 51.5
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.8e-22 109.4 99 52.5
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 2.4e-22 109.0 99 50.5
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 2.4e-22 109.0 99 47.5
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 2.4e-22 109.0 99 51.5
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 3.1e-22 108.6 99 51.5
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 5.2e-22 107.8 99 50.5
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 6.8e-22 107.5 100 52.0
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 8.9e-22 107.1 99 52.5
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 1.2e-21 106.7 86 60.5
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 1.5e-21 106.3 99 49.5
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 1.5e-21 106.3 99 47.5
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 3.4e-21 105.1 111 47.7
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 3.4e-21 105.1 99 50.5
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 4.4e-21 104.8 99 55.6
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 5.8e-21 104.4 99 48.5
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 9.9e-21 103.6 99 50.5
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.3e-20 103.2 99 47.5
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 1.3e-20 103.2 120 45.0
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 1.3e-20 103.2 99 50.5
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 1.7e-20 102.8 99 51.5
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 1.7e-20 102.8 99 54.5
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 1.4e-19 99.8 124 40.3
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 1.2e-18 96.7 101 46.5
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 1.6e-18 96.3 99 48.5
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 2.1e-18 95.9 99 48.5
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 8.7e-17 90.5 99 45.5
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 5.6e-16 87.8 105 51.4
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.2e-12 75.9 100 40.0
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 3.8e-12 75.1 99 42.4
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 6.4e-12 74.3 108 37.0
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 1.9e-11 72.8 100 43.0
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.3e-09 65.9 100 38.0
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 2.5e-08 62.4 104 33.7
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 5.6e-08 61.2 101 32.7
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 7.3e-08 60.8 48 58.3
Sed0023875 Sechium edule HOM05D004567 ORTHO05D005726 1.6e-07 59.7 87 40.2
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.1e-06 57.0 62 43.5
SEGI_29421 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 4.0e-06 55.1 89 36.0


User provided reference genes

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