Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.1e-182 641.0 328 100.0
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.0e-85 320.1 312 58.7
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-82 309.3 382 50.8
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 9.3e-67 258.1 137 90.5
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.2e-51 206.5 248 47.2
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.6e-50 203.0 257 44.7
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.4e-49 201.1 129 76.7
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-23 114.8 120 57.5
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-23 114.8 120 57.5
Rhsim09G0060300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-23 114.8 120 59.2
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.3e-23 112.1 53 92.5
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.7e-21 107.1 181 34.3
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.7e-21 107.1 163 35.0
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.7e-21 107.1 163 35.0
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.7e-21 107.1 163 35.0
Rhsim04G0116700 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.9e-21 105.9 48 100.0
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.0e-20 105.1 133 39.8
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.3e-20 104.0 211 31.8
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.0e-20 102.8 137 42.3
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.5e-19 98.6 136 41.2
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.8e-18 97.1 137 37.2
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.6e-18 96.7 60 66.7
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.6e-18 96.7 60 66.7
Rhsim05G0163900 Rhododendron simsii HOM05D000030 ORTHO05D338429 1.8e-17 94.4 69 78.3
Rhsim06G0106100 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.2e-16 91.7 56 87.5
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-13 81.6 144 38.9
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.7e-12 77.8 140 34.3
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-11 73.9 149 36.2
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.5e-11 72.0 130 33.1
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.2e-10 71.6 137 27.0
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 1.6e-10 71.2 141 27.7
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.6e-10 71.2 130 33.1
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.6e-10 70.1 206 27.2
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.1e-09 67.0 131 32.8
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 3.4e-08 63.5 134 27.6
Migut.N00810 Erythranthe guttata HOM05D000791 ORTHO05D000669 9.8e-08 62.0 130 29.2
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 1.3e-07 61.6 128 26.6
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.3e-07 61.6 254 22.0
Migut.F01288 Erythranthe guttata HOM05D000791 ORTHO05D000669 1.7e-07 61.2 132 28.8
Sc14g0008150 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.7e-07 61.2 91 33.0
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.9e-07 60.5 336 20.5
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.4e-07 59.3 109 27.5
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.3e-07 58.9 109 27.5
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-06 58.2 105 27.6
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-06 57.8 109 25.7
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 1.9e-06 57.8 124 32.3
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-06 57.4 128 28.9
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.2e-06 57.0 128 25.8
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 3.2e-06 57.0 129 26.4
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 4.1e-06 56.6 114 28.1
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-06 56.2 128 25.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-06 56.2 128 25.8
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-06 56.2 128 25.8
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-06 56.2 130 25.4
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-06 56.2 128 25.8
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-06 56.2 130 25.4
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-06 56.2 126 31.0
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.4e-06 56.2 123 28.5
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.0e-06 55.8 143 25.2
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.0e-06 55.8 124 30.6
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-06 55.8 128 28.9
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.2e-06 55.5 90 35.6
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 55.5 201 27.9
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.2e-06 55.5 128 28.9


User provided reference genes

Program Settings