Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0111200 Rhododendron simsii HOM05D002974 ORTHO05D002992 1.4e-53 212.6 103 100.0
Rhsim04G0112500 Rhododendron simsii HOM05D002974 ORTHO05D002992 1.4e-53 212.6 103 100.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 3.4e-15 85.1 96 49.0
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.4e-15 85.1 109 48.6
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 9.9e-15 83.6 99 47.5
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.8e-14 81.6 109 47.7
Rhsim10G0015600 Rhododendron simsii HOM05D001812 ORTHO05D001874 4.9e-14 81.3 71 64.8
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 5.4e-13 77.8 102 47.1
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 2.7e-12 75.5 119 38.7
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 7.8e-12 73.9 98 40.8
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 1.3e-11 73.2 109 44.0
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.5e-10 69.7 107 40.2
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.5e-10 69.7 96 44.8
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 1.9e-10 69.3 109 39.4
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.5e-10 68.9 106 44.3
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 3.3e-10 68.6 106 39.6
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 3.3e-10 68.6 103 40.8
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 4.3e-10 68.2 104 39.4
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 4.3e-10 68.2 126 38.9
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 2.1e-09 65.9 108 39.8
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.1e-09 65.9 105 40.0
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 2.1e-09 65.9 100 41.0
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.1e-08 63.5 105 40.0
Dinv12041 Davidia involucrata HOM05D002974 ORTHO05D002992 1.4e-08 63.2 35 82.9
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 1.4e-08 63.2 100 40.0
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 1.5e-07 59.7 113 34.5
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 2.0e-07 59.3 113 38.1
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 2.6e-07 58.9 117 35.0
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 2.6e-07 58.9 130 37.7
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.6e-07 58.9 104 40.4
COL.COLO4_04711 Corchorus olitorius HOM05D002974 ORTHO05D002992 3.4e-07 58.5 104 36.5
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 4.5e-07 58.2 117 34.2
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 7.6e-07 57.4 120 34.2
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 2.2e-06 55.8 109 38.5
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.2e-06 55.8 98 39.8
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 3.8e-06 55.1 113 40.7
Sabra06G0026200 Salix brachista HOM05D002974 ORTHO05D002992 4.9e-06 54.7 114 32.5
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 6.4e-06 54.3 118 33.9
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 8.4e-06 53.9 96 39.6
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 8.4e-06 53.9 108 39.8


User provided reference genes

Program Settings