Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0103200 Rhododendron simsii HOM05D000708 ORTHO05D038125 5.7e-53 210.7 110 100.0
vmacro09070 Vaccinium macrocarpon HOM05D000708 ORTHO05D003167 4.7e-31 137.9 94 74.5
Actinidia17232 Actinidia chinensis HOM05D000708 ORTHO05D003167 1.4e-19 99.8 103 56.3
Dinv12404 Davidia involucrata HOM05D000708 ORTHO05D003167 4.1e-19 98.2 95 56.8
Rhsim04G0102800 Rhododendron simsii HOM05D000708 ORTHO05D003167 4.6e-18 94.7 67 74.6
Dinv39628 Davidia involucrata HOM05D000708 ORTHO05D003167 1.3e-17 93.2 100 54.0
CSS0022630 Camellia sinensis var. sinensis HOM05D000708 ORTHO05D003167 1.1e-16 90.1 103 50.5
Actinidia28190 Actinidia chinensis HOM05D000708 ORTHO05D003167 2.1e-15 85.9 95 51.6
Gorai.003G090500 Gossypium raimondii HOM05D000708 ORTHO05D003167 1.5e-13 79.7 100 47.0
Gohir.D03G069705 Gossypium hirsutum HOM05D000708 ORTHO05D003167 3.4e-13 78.6 100 46.0
Prupe.7G055700 Prunus persica HOM05D000708 ORTHO05D003167 3.4e-13 78.6 100 47.0
Cpa.g.sc329.1 Carica papaya HOM05D000708 ORTHO05D003167 9.9e-13 77.0 101 47.5
FAN05G0687 Fragaria x ananassa HOM05D000708 ORTHO05D003167 2.2e-12 75.9 100 45.0
Manes.08G052900 Manihot esculenta HOM05D000708 ORTHO05D003167 2.2e-12 75.9 99 50.5
Potri.006G048500 Populus trichocarpa HOM05D000708 ORTHO05D003167 2.2e-12 75.9 99 45.5
Hma1.2p1_0788F.1_g218050 Hydrangea macrophylla HOM05D000708 ORTHO05D003167 3.8e-12 75.1 99 48.5
FvH4_6g24320 Fragaria vesca HOM05D000708 ORTHO05D003167 4.9e-12 74.7 100 45.0
FAN14G0120 Fragaria x ananassa HOM05D000708 ORTHO05D003167 4.9e-12 74.7 100 45.0
RcHm_v2.0_Chr3g0483201 Rosa chinensis HOM05D000708 ORTHO05D003167 4.9e-12 74.7 100 45.0
COL.COLO4_20031 Corchorus olitorius HOM05D000708 ORTHO05D003167 6.4e-12 74.3 100 46.0
Duzib093G1872 Durio zibethinus HOM05D000708 ORTHO05D003167 6.4e-12 74.3 100 47.0
Duzib128G1089 Durio zibethinus HOM05D000708 ORTHO05D003167 8.4e-12 73.9 94 44.7
TAR633G1579 Trochodendron aralioides HOM05D000708 ORTHO05D003167 8.4e-12 73.9 102 45.1
Duzib106G0357 Durio zibethinus HOM05D000708 ORTHO05D003167 1.4e-11 73.2 99 44.4
AUR62026064 Chenopodium quinoa HOM05D000708 ORTHO05D003167 1.9e-11 72.8 108 41.7
Cfa021093 Carpinus fangiana HOM05D000708 ORTHO05D003167 2.4e-11 72.4 97 44.3
Haze_19823 Corylus avellana HOM05D000708 ORTHO05D003167 2.4e-11 72.4 97 44.3
Haze_19828 Corylus avellana HOM05D000708 ORTHO05D003167 2.4e-11 72.4 97 44.3
CsaV3_4G028900 Cucumis sativus L. HOM05D000708 ORTHO05D003167 4.2e-11 71.6 108 41.7
Prupe.7G055600 Prunus persica HOM05D000708 ORTHO05D003167 7.1e-11 70.9 103 46.6
Ah.13g076520 Amaranthus hybridus HOM05D000708 ORTHO05D003167 9.3e-11 70.5 107 44.9
CSS0044933 Camellia sinensis var. sinensis HOM05D000708 ORTHO05D003167 2.1e-10 69.3 103 44.7
Sabra06G0033800 Salix brachista HOM05D000708 ORTHO05D003167 4.6e-10 68.2 100 43.0
Nitab4.5_0003307g0040 Nicotiana tabacum HOM05D000708 ORTHO05D003167 1.0e-09 67.0 101 43.6
QL07p002654 Quercus lobata HOM05D000708 ORTHO05D003167 1.0e-09 67.0 103 43.7
EL10Ac3g07108 Beta vulgaris HOM05D000708 ORTHO05D003167 1.3e-09 66.6 105 43.8
GSVIVG01033248001 Vitis vinifera HOM05D000708 ORTHO05D003167 2.3e-09 65.9 100 47.0
Gohir.A02G108505 Gossypium hirsutum HOM05D000708 ORTHO05D003167 3.0e-09 65.5 101 41.6
Peaxi162Scf00109g00144 Petunia axillaris HOM05D000708 ORTHO05D003167 3.0e-09 65.5 99 45.5
CiPaw.10G034400 Carya illinoinensis HOM05D000708 ORTHO05D003167 3.9e-09 65.1 97 42.3
Gorai.006G136200 Gossypium raimondii HOM05D000708 ORTHO05D003167 3.9e-09 65.1 61 52.5
TWI53G1763 Tripterygium wilfordii HOM05D000708 ORTHO05D003167 3.9e-09 65.1 85 43.5
Thecc.05G150400 Theobroma cacao HOM05D000708 ORTHO05D003167 5.1e-09 64.7 100 41.0
Hund24691 Selenicereus undatus HOM05D000708 ORTHO05D003167 6.6e-09 64.3 99 38.4
ClCG04G003530 Citrullus lanatus HOM05D000708 ORTHO05D003167 1.1e-08 63.5 60 55.0
CAN.G676.18 Capsicum annuum HOM05D000708 ORTHO05D003167 1.5e-08 63.2 100 44.0
CiPaw.09G039500 Carya illinoinensis HOM05D000708 ORTHO05D003167 5.6e-08 61.2 97 40.2
Actinidia39210 Actinidia chinensis HOM05D000708 ORTHO05D038125 7.3e-08 60.8 75 50.7
TAR636G0625 Trochodendron aralioides HOM05D000708 ORTHO05D003167 7.3e-08 60.8 97 44.3
PGR004G1001 Punica granatum HOM05D000708 ORTHO05D003167 1.3e-07 60.1 101 38.6
DCAR_020501 Daucus carota HOM05D000708 ORTHO05D003167 2.8e-07 58.9 123 38.2
Nn7g36346 Nelumbo nucifera HOM05D000708 ORTHO05D003167 3.6e-07 58.5 102 43.1
MD12G1075400 Malus domestica HOM05D000708 ORTHO05D003167 4.8e-07 58.2 101 42.6
Solyc04g016180.3 Solanum lycopersicum HOM05D000708 ORTHO05D003167 4.8e-07 58.2 66 50.0
PGSC0003DMG400027288 Solanum tuberosum HOM05D000708 ORTHO05D003167 6.2e-07 57.8 67 47.8
MD14G1074300 Malus domestica HOM05D000708 ORTHO05D003167 8.1e-07 57.4 67 47.8
Gohir.D09G117900 Gossypium hirsutum HOM05D000708 ORTHO05D003167 1.4e-06 56.6 65 46.2
Sopen04g008220 Solanum pennellii HOM05D000708 ORTHO05D003167 2.4e-06 55.8 66 48.5
CANSAT80G0738 Cannabis sativa HOM05D000708 ORTHO05D003167 5.3e-06 54.7 100 42.0
MD12G1075900 Malus domestica HOM05D000708 ORTHO05D003167 6.9e-06 54.3 67 46.3
Solyc10g080010.2 Solanum lycopersicum HOM05D000708 ORTHO05D003167 6.9e-06 54.3 95 38.9
Sopen10g030620 Solanum pennellii HOM05D000708 ORTHO05D003167 6.9e-06 54.3 95 38.9
CANSAT80G2754 Cannabis sativa HOM05D000708 ORTHO05D003167 9.0e-06 53.9 100 42.0
TAR636G0245 Trochodendron aralioides HOM05D000708 ORTHO05D003167 9.0e-06 53.9 88 44.3


User provided reference genes

Program Settings