Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 0.0e+00 1138.6 595 100.0
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.2e-251 871.7 596 77.9
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.7e-250 868.6 591 77.8
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.4e-246 855.5 595 75.3
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 4.2e-243 844.7 552 82.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.6e-226 789.6 591 71.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.4e-222 776.5 595 69.7
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.7e-220 769.6 595 68.4
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 3.0e-220 768.8 591 68.4
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.1e-218 762.7 595 68.2
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.8e-218 762.3 582 68.2
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.1e-217 760.4 595 68.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.8e-217 759.6 590 67.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.2e-216 756.9 595 67.6
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 4.4e-216 755.0 595 69.9
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.7e-215 751.9 595 69.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 4.9e-215 751.5 599 69.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.9e-215 751.5 590 66.6
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.1e-214 750.4 594 67.7
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.9e-214 749.6 595 65.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.2e-214 748.8 594 67.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.1e-214 747.7 595 69.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.2e-213 746.9 591 67.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.1e-213 746.1 591 69.0
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.7e-213 745.7 591 67.3
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 6.0e-213 744.6 577 67.4
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.0e-212 743.8 595 68.9
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-212 743.4 610 68.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.7e-212 743.0 595 67.4
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.9e-212 741.9 591 66.7
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 6.6e-212 741.1 591 67.3
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 8.6e-212 740.7 590 67.1
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.9e-211 739.6 595 67.6
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.9e-211 739.6 617 63.5
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 7.3e-211 737.6 595 66.4
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-209 733.8 595 68.7
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.4e-209 733.4 587 65.1
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.4e-209 733.4 589 67.7
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 5.2e-209 731.5 593 64.8
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.2e-208 730.3 595 65.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 2.0e-208 729.6 591 64.8
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 5.8e-208 728.0 590 65.6
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.7e-207 726.5 592 66.0
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.4e-206 722.6 592 65.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 4.1e-206 721.8 591 65.0
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 5.4e-206 721.5 593 64.2
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.2e-205 720.3 591 64.8
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 6.0e-205 718.0 595 65.4
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.3e-204 716.1 590 63.7
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 3.0e-204 715.7 595 64.9
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 5.1e-204 714.9 592 65.4
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 6.6e-204 714.5 590 64.4
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 8.6e-204 714.1 590 65.3
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.5e-203 713.4 595 65.2
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.5e-203 713.4 595 64.7
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.5e-203 712.6 592 66.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.5e-203 712.6 595 63.9
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 4.3e-203 711.8 591 63.1
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.6e-202 709.9 591 65.3
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 4.7e-202 708.4 586 63.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 5.2e-201 704.9 595 63.0
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 1.2e-200 703.7 595 64.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.2e-199 699.5 590 63.1
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.2e-199 699.5 590 63.6
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.9e-199 699.1 598 63.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.1e-198 697.2 590 63.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 9.3e-198 694.1 591 62.4
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 3.0e-196 689.1 590 62.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 4.3e-195 685.3 667 58.3
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 7.6e-192 674.5 595 61.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 2.9e-191 672.5 595 60.8
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 6.4e-191 671.4 595 61.3
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 2.4e-190 669.5 595 61.3
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.4e-190 669.5 591 62.8
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.2e-189 667.2 591 61.8
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.1e-189 666.4 595 60.8
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.1e-189 666.4 590 60.7
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.3e-188 663.7 595 60.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 9.6e-187 657.5 595 60.2
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.2e-183 646.4 586 61.4
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.4e-183 644.4 555 61.6
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 5.4e-182 641.7 590 58.6
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.3e-175 620.5 595 58.3
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.3e-175 620.5 595 58.3
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.7e-175 620.2 595 58.2
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.7e-175 620.2 595 58.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.2e-175 619.8 508 65.4
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 3.8e-175 619.0 595 58.2
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.3e-172 609.8 594 55.7
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.9e-171 606.7 592 56.2
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 5.3e-169 598.6 597 55.4
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.5e-168 597.0 550 59.6
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 5.8e-168 595.1 595 53.6
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 5.5e-166 588.6 508 61.6
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.4e-161 573.9 638 51.6
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.3e-139 499.6 443 59.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 7.3e-118 428.7 452 55.3
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 9.8e-115 418.3 606 40.8
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.7e-112 410.2 410 58.5
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 2.8e-109 400.2 587 42.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 5.8e-99 365.9 619 37.8
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.2e-97 360.1 301 66.1
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.9e-95 353.2 313 63.6
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 3.6e-93 346.7 619 38.0
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 4.7e-93 346.3 259 70.7
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-92 344.0 248 70.2
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 4.9e-90 336.3 597 36.9
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 9.9e-83 312.0 260 66.9
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 6.2e-77 292.7 383 52.7
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 4.6e-72 276.6 204 66.2
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.7e-64 250.8 265 50.6
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 7.4e-54 216.1 172 68.0
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.4e-49 201.8 257 49.8
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 4.3e-46 190.3 620 26.8
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-41 175.6 151 62.9
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 5.5e-33 146.7 157 59.9
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.3e-23 114.8 65 78.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.7e-13 82.0 54 85.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 4.7e-08 63.9 42 71.4
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 8.8e-07 59.7 64 45.3


User provided reference genes

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