Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.1e-156 556.6 273 100.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 7.1e-137 490.7 273 87.9
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 2.2e-101 372.9 278 68.0
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 3.7e-101 372.1 283 69.3
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 2.4e-100 369.4 277 70.0
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 3.1e-100 369.0 276 69.2
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 3.1e-100 369.0 284 67.3
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 7.0e-100 367.9 285 65.6
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 9.1e-100 367.5 278 65.8
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 9.1e-100 367.5 275 69.1
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 9.1e-100 367.5 288 66.3
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 9.1e-100 367.5 279 67.7
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.1e-100 367.5 283 66.4
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 9.1e-100 367.5 284 67.3
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 2.6e-99 365.9 285 64.9
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 1.0e-98 364.0 289 65.4
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 7.2e-97 357.8 278 66.5
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.7e-96 355.1 278 64.7
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 4.7e-96 355.1 286 65.0
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 8.0e-96 354.4 284 64.8
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.0e-95 354.0 279 64.9
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.4e-95 353.6 277 65.0
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.4e-95 353.6 276 66.7
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.8e-95 353.2 299 62.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 2.3e-95 352.8 304 61.5
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 6.7e-95 351.3 290 63.8
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 6.7e-95 351.3 290 62.8
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 8.8e-95 350.9 288 64.2
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 8.8e-95 350.9 277 67.5
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 2.0e-94 349.7 291 62.5
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 2.6e-94 349.4 279 65.9
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.7e-93 346.7 285 61.8
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 1.7e-93 346.7 288 64.6
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.7e-93 346.7 293 60.8
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.2e-93 346.3 293 61.4
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 2.8e-93 345.9 295 61.0
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 3.7e-93 345.5 289 63.0
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 4.8e-93 345.1 187 85.0
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 8.3e-93 344.4 292 62.0
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 3.1e-92 342.4 285 64.2
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 4.1e-92 342.0 282 62.8
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 7.0e-92 341.3 279 62.4
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 2.0e-91 339.7 280 62.1
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 2.0e-91 339.7 319 57.7
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 5.9e-91 338.2 292 61.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 2.9e-90 335.9 285 61.1
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 2.9e-90 335.9 285 61.1
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 2.9e-90 335.9 285 61.1
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 3.8e-90 335.5 285 60.7
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 3.8e-90 335.5 271 65.7
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 5.0e-90 335.1 288 61.8
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 6.5e-90 334.7 287 61.0
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 3.2e-89 332.4 291 59.1
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 3.2e-89 332.4 273 62.6
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 5.5e-89 331.6 267 64.8
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.2e-88 330.5 272 61.4
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.2e-88 330.5 294 59.5
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.6e-88 330.1 279 62.4
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 2.1e-88 329.7 295 59.3
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 2.7e-88 329.3 289 59.9
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.6e-88 328.9 273 60.8
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 3.6e-88 328.9 243 66.3
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 4.7e-88 328.6 273 61.9
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 6.1e-88 328.2 272 61.8
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 4.0e-87 325.5 263 63.5
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 4.0e-87 325.5 284 60.9
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.5e-86 323.6 284 59.5
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.5e-86 323.6 198 78.8
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 4.4e-86 322.0 191 77.0
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 7.5e-86 321.2 291 59.5
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 6.3e-85 318.2 303 57.1
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 3.1e-84 315.8 208 71.2
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 7.0e-84 314.7 281 59.4
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 5.9e-83 311.6 282 61.0
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 2.5e-81 306.2 281 57.7
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 5.5e-81 305.1 287 57.1
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 9.5e-81 304.3 274 60.9
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.2e-80 303.9 276 58.0
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.8e-79 300.1 186 74.7
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.0e-78 296.6 278 57.9
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 5.7e-78 295.0 171 79.5
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 1.2e-75 287.3 166 78.9
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 3.9e-74 282.3 281 54.8
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.5e-73 280.4 245 58.4
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 1.2e-72 277.3 165 78.8
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 4.7e-72 275.4 156 81.4
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.5e-70 270.4 240 60.8
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 5.8e-70 268.5 156 80.1
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 1.7e-69 266.9 161 78.3
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 8.3e-69 264.6 172 68.6
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 8.6e-66 254.6 209 62.2
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.0e-62 243.4 290 51.0
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 3.4e-62 242.7 148 76.4
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 3.4e-62 242.7 238 57.1
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 3.4e-62 242.7 230 58.3
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 4.1e-60 235.7 227 52.0
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.0e-58 231.1 193 58.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.0e-58 229.6 166 63.9
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.5e-57 226.5 192 56.2
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.8e-55 220.3 192 55.2
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 3.0e-50 203.0 189 50.8
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 5.2e-47 192.2 233 50.6
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.5e-46 190.7 273 43.2
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.6e-46 189.9 283 42.4
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 9.9e-46 188.0 278 43.2
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 3.8e-45 186.0 172 56.4
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.3e-42 176.8 112 73.2
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 4.3e-41 172.6 335 35.5
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.4e-39 166.8 210 45.7
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 2.9e-37 159.8 112 68.8
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.6e-35 154.1 175 48.6
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 7.3e-33 145.2 182 41.2
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 1.2e-22 111.3 70 74.3
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.0e-10 71.6 44 77.3
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 4.3e-09 66.2 132 38.6
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 1.8e-07 60.8 62 43.5
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 6.9e-07 58.9 39 69.2


User provided reference genes

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