Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0077700 Rhododendron simsii HOM05D008652 ORTHO05D010516 0.0e+00 1350.9 662 100.0
Rhsim13G0214800 Rhododendron simsii HOM05D008652 ORTHO05D010516 0.0e+00 1132.9 557 99.8
Rhsim13G0215000 Rhododendron simsii HOM05D008652 ORTHO05D010516 0.0e+00 1132.9 557 99.8
Rhsim10G0189800 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.8e-311 1072.0 681 80.0
RhsimUnG0190200 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.7e-301 1038.9 556 93.0
Rhsim11G0082000 Rhododendron simsii HOM05D008652 ORTHO05D010516 5.5e-300 1033.9 524 97.1
Rhsim09G0174400 Rhododendron simsii HOM05D008652 ORTHO05D010516 9.3e-300 1033.1 540 94.8
Rhsim01G0057100 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.1e-299 1031.9 539 95.0
Rhsim07G0001400 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.7e-291 1004.2 600 85.2
Rhsim11G0116900 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.5e-278 961.1 475 99.4
Rhsim11G0091900 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.3e-274 948.7 474 98.1
Rhsim02G0247600 Rhododendron simsii HOM05D008652 ORTHO05D010516 8.8e-266 920.2 464 97.2
RhsimUnG0235400 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.0e-265 919.1 658 74.2
Rhsim01G0036800 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.0e-250 868.2 475 91.4
RhsimUnG0225400 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.3e-242 842.4 591 75.6
Rhsim01G0036900 Rhododendron simsii HOM05D008652 ORTHO05D010516 6.2e-227 791.2 509 79.2
RhsimUnG0049600 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.2e-206 723.8 591 67.0
Rhsim02G0080500 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.2e-198 697.2 375 92.0
RhsimUnG0066600 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.7e-195 685.6 540 70.0
Rhsim12G0055600 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.3e-164 582.8 285 97.5
RhsimUnG0066700 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.8e-160 569.3 336 87.8
Rhsim04G0124600 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.5e-148 528.5 467 62.1
Rhsim01G0164200 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.1e-135 488.0 876 37.1
Rhsim05G0058300 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.8e-134 483.4 326 74.8
Rhsim09G0159700 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.5e-127 460.3 225 97.8
Rhsim01G0057300 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.7e-120 437.6 246 89.8
Rhsim10G0135200 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.5e-111 407.9 327 66.4
Rhsim02G0196700 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.1e-106 391.7 424 55.2
RhsimUnG0233400 Rhododendron simsii HOM05D000906 ORTHO05D000713 2.1e-102 377.5 664 39.3
Rhsim01G0057400 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.6e-102 376.7 181 100.0
RhsimUnG0103900 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.1e-98 362.5 466 47.9
RhsimUnG0128100 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.6e-97 361.3 266 70.3
RhsimUnG0184800 Rhododendron simsii HOM05D008652 ORTHO05D010516 6.0e-97 359.4 466 47.6
Rhsim01G0085000 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.4e-93 348.2 661 35.9
Rhsim10G0127300 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.2e-92 345.1 235 68.9
Rhsim06G0123400 Rhododendron simsii HOM05D008652 ORTHO05D000423 3.2e-90 337.0 195 82.6
Rhsim10G0204200 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.2e-66 256.1 128 96.1
Rhsim06G0123300 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.8e-64 251.5 199 71.9
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 5.9e-60 236.5 304 45.4
Rhsim09G0135400 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.2e-58 230.3 549 33.5
Rhsim09G0074500 Rhododendron simsii HOM05D008652 ORTHO05D010516 5.2e-48 196.8 421 35.4
Rhsim10G0117300 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.9e-34 151.8 480 26.5
Rhsim04G0124500 Rhododendron simsii HOM05D008652 ORTHO05D010516 5.2e-32 143.7 81 85.2
RcHm_v2.0_Chr6g0263201 Rosa chinensis HOM05D009186 ORTHO05D011460 8.9e-24 116.3 150 38.0
Rhsim01G0137700 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.4e-23 114.0 260 32.7
RhsimUnG0128000 Rhododendron simsii HOM05D008652 ORTHO05D000372 9.8e-23 112.8 74 75.7
Rhsim02G0050900 Rhododendron simsii HOM05D002672 ORTHO05D002887 2.2e-22 111.7 159 35.2
CSS0042340 Camellia sinensis var. sinensis HOM05D058731 ORTHO05D010516 2.5e-18 98.2 66 63.6
TWI38G1206 Tripterygium wilfordii HOM05D000047 ORTHO05D014218 2.0e-15 88.6 134 38.8
Nitab4.5_0010033g0080 Nicotiana tabacum HOM05D015745 ORTHO05D010516 1.7e-14 85.5 115 43.5
Nitab4.5_0001023g0070 Nicotiana tabacum HOM05D015745 ORTHO05D010516 1.2e-12 79.3 85 43.5
Nitab4.5_0001796g0240 Nicotiana tabacum HOM05D015745 ORTHO05D010516 6.6e-11 73.6 119 39.5
Rhsim11G0010900 Rhododendron simsii HOM05D008652 ORTHO05D010516 8.6e-11 73.2 97 42.3
Nitab4.5_0005091g0010 Nicotiana tabacum HOM05D015745 ORTHO05D010516 2.1e-09 68.6 106 37.7
FvH4_4g05274 Fragaria vesca HOM05D000047 ORTHO05D000044 6.2e-09 67.0 148 29.7
FAN16G2863 Fragaria x ananassa HOM05D009186 ORTHO05D011460 3.1e-08 64.7 145 26.9
TWI31G0444 Tripterygium wilfordii HOM05D000047 ORTHO05D001383 2.6e-07 61.6 85 35.3
Sc03g0004770 Simmondsia chinensis HOM05D008652 ORTHO05D010516 2.2e-06 58.5 63 46.0
FvH4_4g18553 Fragaria vesca HOM05D041677 ORTHO05D014625 4.9e-06 57.4 54 44.4


User provided reference genes

Program Settings