Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.7e-64 249.2 125 100.0
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 4.6e-22 108.2 124 51.6
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.7e-21 106.3 140 47.1
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 5.6e-20 101.3 119 52.9
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 9.5e-20 100.5 128 50.0
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 1.6e-19 99.8 115 53.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 5.2e-18 94.7 116 52.6
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 4.4e-17 91.7 107 53.3
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 3.7e-16 88.6 110 50.9
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 8.3e-16 87.4 142 45.1
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 6.0e-14 81.3 126 45.2
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 8.6e-13 77.4 115 43.5
Nitab4.5_0005380g0010 Nicotiana tabacum HOM05D006722 ORTHO05D007944 1.9e-12 76.3 105 47.6
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 3.3e-12 75.5 118 44.9
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 5.6e-12 74.7 115 42.6
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.6e-11 73.2 118 44.1
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 1.6e-11 73.2 80 53.8
Actinidia11069 Actinidia chinensis HOM05D006722 ORTHO05D007944 3.6e-11 72.0 99 50.5
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 3.6e-11 72.0 125 43.2
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 3.6e-11 72.0 120 42.5
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 3.6e-11 72.0 122 44.3
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 3.1e-10 68.9 124 41.1
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 5.2e-10 68.2 107 42.1
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 2.6e-09 65.9 121 38.0
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 3.4e-09 65.5 110 45.5
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 3.4e-09 65.5 119 40.3
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 5.8e-09 64.7 115 37.4
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 9.9e-09 63.9 107 43.9
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 1.3e-08 63.5 116 41.4
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 2.2e-08 62.8 119 38.7
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 2.9e-08 62.4 124 42.7
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 4.9e-08 61.6 108 37.0
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 8.3e-08 60.8 132 36.4
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 1.4e-07 60.1 131 39.7
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 7.1e-07 57.8 116 41.4
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 9.2e-07 57.4 109 39.4
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 1.2e-06 57.0 133 39.8
MBI02_g19252_MAGBIO Magnolia biondii HOM05D006722 ORTHO05D007944 2.7e-06 55.8 78 46.2
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 2.7e-06 55.8 149 33.6
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 6.0e-06 54.7 120 35.8


User provided reference genes

Program Settings