Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0060900 Rhododendron simsii HOM05D010054 ORTHO05D000001 9.7e-228 793.1 395 100.0
Rhsim04G0138000 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.3e-219 766.1 433 90.5
Rhsim03G0198100 Rhododendron simsii HOM05D010054 ORTHO05D000001 3.7e-219 764.6 433 90.3
Rhsim05G0231100 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.5e-212 742.7 422 90.0
Rhsim10G0192500 Rhododendron simsii HOM05D010054 ORTHO05D000001 8.0e-190 667.2 404 82.2
Rhsim11G0015400 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.1e-183 646.7 431 76.3
Rhsim11G0011900 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.9e-170 602.8 377 79.6
Rhsim08G0129500 Rhododendron simsii HOM05D010054 ORTHO05D000001 3.5e-169 598.6 405 74.6
RhsimUnG0016700 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.1e-153 546.2 410 68.5
Rhsim12G0091500 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.7e-137 492.7 366 69.1
Rhsim10G0141600 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.1e-121 439.9 377 63.9
Rhsim09G0164100 Rhododendron simsii HOM05D010054 ORTHO05D000001 7.9e-121 438.0 379 62.0
Rhsim09G0077800 Rhododendron simsii HOM05D010054 ORTHO05D000001 3.9e-120 435.6 361 62.3
Rhsim06G0164800 Rhododendron simsii HOM05D010054 ORTHO05D000001 1.4e-109 400.6 395 56.2
Rhsim05G0108900 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.3e-91 340.1 357 53.8
Rhsim11G0008600 Rhododendron simsii HOM05D010054 ORTHO05D000001 6.0e-76 288.9 360 47.5
Rhsim02G0182800 Rhododendron simsii HOM05D010054 ORTHO05D000001 3.6e-65 253.1 178 70.8
Rhsim02G0182700 Rhododendron simsii HOM05D010054 ORTHO05D000001 4.3e-42 176.4 310 39.4
Rhsim01G0072200 Rhododendron simsii HOM05D010054 ORTHO05D000001 7.3e-42 175.6 404 36.1
CSS0049243 Camellia sinensis var. sinensis HOM05D010054 ORTHO05D000001 7.1e-37 159.1 376 29.0
RhsimUnG0190900 Rhododendron simsii HOM05D010054 ORTHO05D000001 2.7e-36 157.1 96 80.2
Rhsim10G0108000 Rhododendron simsii HOM05D010054 ORTHO05D000001 3.9e-35 153.3 387 34.1
CSS0011173 Camellia sinensis var. sinensis HOM05D010054 ORTHO05D000001 4.9e-30 136.3 365 29.0
RhsimUnG0146000 Rhododendron simsii HOM05D010054 ORTHO05D000001 6.0e-28 129.4 162 49.4
Rhsim09G0079800 Rhododendron simsii HOM05D000006 ORTHO05D000001 1.3e-25 121.7 78 80.8
Dinv09509 Davidia involucrata HOM05D000031 ORTHO05D001033 2.0e-23 114.4 218 31.2
Ca_25187_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.5e-13 79.7 195 27.2
Ca_12219_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 7.2e-13 79.3 248 26.2
Ca_05027_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.2e-12 78.6 196 27.0
Ca_24245_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.6e-12 78.2 237 26.2
Ca_12495_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.1e-12 77.8 209 26.8
Ca_20418_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.1e-12 77.8 247 26.3
Manes.17G097500 Manihot esculenta HOM05D001572 ORTHO05D000733 2.1e-12 77.8 187 26.7
Ca_05787_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.7e-12 77.4 241 26.1
Ca_13971_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.7e-12 77.4 215 26.0
Ca_20461_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.7e-12 77.4 194 28.9
Ca_20523_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.6e-12 76.6 190 27.9
Ca_07232_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 6.1e-12 76.3 259 23.6
Ca_12062_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 6.1e-12 76.3 200 26.5
Ca_13684_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 7.9e-12 75.9 207 25.6
Manes.15G146400 Manihot esculenta HOM05D001572 ORTHO05D000585 7.9e-12 75.9 277 24.2
Ca_12417_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.0e-11 75.5 196 27.0
Ca_14521_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.0e-11 75.5 198 27.8
Ca_27508_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.0e-11 75.5 277 24.9
Medtr7g039400 Medicago truncatula HOM05D001572 ORTHO05D000733 1.0e-11 75.5 221 26.2
Ca_14337_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.4e-11 75.1 249 27.3
Ca_23132_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.8e-11 74.7 194 28.4
Dinv43058 Davidia involucrata HOM05D015440 ORTHO05D000001 1.8e-11 74.7 170 27.6
Medtr1g038730 Medicago truncatula HOM05D001572 ORTHO05D000733 1.8e-11 74.7 224 27.2
Ca_02836_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.0e-11 73.9 194 26.8
Ca_19266_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.0e-11 73.9 190 26.8
Ca_02811_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.9e-11 73.6 274 25.5
Ca_19688_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.9e-11 73.6 200 26.0
TPR.G20326 Trifolium pratense HOM05D001572 ORTHO05D000733 3.9e-11 73.6 187 26.7
Ca_05069_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.1e-11 73.2 198 27.3
Ca_05202_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.1e-11 73.2 276 25.4
Ca_23587_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.1e-11 73.2 251 25.1
Ca_06852_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 8.8e-11 72.4 220 23.6
Ca_12431_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 8.8e-11 72.4 195 25.1
Ca_03344_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 1.1e-10 72.0 241 24.9
Medtr8g075670 Medicago truncatula HOM05D001572 ORTHO05D000733 1.5e-10 71.6 188 25.5
Ca_13778_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.0e-10 71.2 230 24.8
Ca_20654_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.0e-10 71.2 200 25.5
Ca_24205_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.0e-10 71.2 208 26.4
Ca_03329_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.3e-10 70.5 226 24.3
Ca_14193_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.3e-10 70.5 200 26.0
Ca_05112_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.3e-10 70.1 205 25.4
Ca_12177_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 4.3e-10 70.1 237 25.3
Medtr4g037420 Medicago truncatula HOM05D001572 ORTHO05D000733 4.3e-10 70.1 278 23.7
Ca_14788_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.7e-10 69.7 231 25.1
Medtr3g050030 Medicago truncatula HOM05D001572 ORTHO05D000733 9.7e-10 68.9 249 22.9
Ca_06970_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.7e-09 68.2 193 24.9
Ca_24054_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.7e-09 68.2 166 26.5
Ca_03983_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.2e-09 67.8 181 27.1
Ca_22808_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.8e-09 67.4 191 23.6
Medtr0014s0490 Medicago truncatula HOM05D001572 ORTHO05D000733 2.8e-09 67.4 253 23.3
TPR.G36366 Trifolium pratense HOM05D002189 ORTHO05D002233 2.8e-09 67.4 198 23.7
VMungo1383G2969 Vigna mungo HOM05D011023 ORTHO05D002402 2.8e-09 67.4 310 23.2
Ca_24249_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 3.7e-09 67.0 197 26.9
Ca_12224_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.8e-09 66.6 190 25.8
Medtr0043s0140 Medicago truncatula HOM05D001572 ORTHO05D000733 4.8e-09 66.6 191 25.7
Medtr0059s0100 Medicago truncatula HOM05D001572 ORTHO05D000733 4.8e-09 66.6 186 23.7
Dinv11637 Davidia involucrata HOM05D015440 ORTHO05D019087 8.2e-09 65.9 257 23.7
Ca_24182_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.1e-08 65.5 200 23.5
Sopen01g051320 Solanum pennellii HOM05D002432 ORTHO05D000695 1.1e-08 65.5 321 24.3
Sopen03g029120 Solanum pennellii HOM05D002432 ORTHO05D000695 1.1e-08 65.5 321 24.3
Sopen06g002320 Solanum pennellii HOM05D000006 ORTHO05D000695 1.1e-08 65.5 321 24.3
VMungo1383G0822 Vigna mungo HOM05D011023 ORTHO05D002402 1.1e-08 65.5 243 26.7
Ca_12970_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.4e-08 65.1 189 24.9
Ca_24145_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.4e-08 65.1 191 26.2
Ca_12420_v3 Cicer arietinum L. HOM05D002147 ORTHO05D000733 1.8e-08 64.7 202 24.3
Ca_05463_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.4e-08 64.3 172 23.8
VMungo0251G0191 Vigna mungo HOM05D011023 ORTHO05D002402 2.4e-08 64.3 200 25.5
Ca_11735_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.1e-08 63.9 192 26.6
Medtr5g049740 Medicago truncatula HOM05D001572 ORTHO05D000733 3.1e-08 63.9 252 23.0
Medtr6g472020 Medicago truncatula HOM05D001572 ORTHO05D000733 3.1e-08 63.9 189 24.3
Sopen11g023510 Solanum pennellii HOM05D002432 ORTHO05D000695 3.1e-08 63.9 321 24.3
Ca_03158_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.1e-08 63.5 181 25.4
Sopen05g008810 Solanum pennellii HOM05D000006 ORTHO05D000695 4.1e-08 63.5 261 25.3
Sopen06g021660 Solanum pennellii HOM05D000006 ORTHO05D000001 4.1e-08 63.5 261 25.7
Sopen11g021000 Solanum pennellii HOM05D000006 ORTHO05D000001 4.1e-08 63.5 370 23.2
Ca_04785_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.3e-08 63.2 241 25.3
Dinv07940 Davidia involucrata HOM05D015440 ORTHO05D019087 5.3e-08 63.2 95 31.6
Dinv18414 Davidia involucrata HOM05D015440 ORTHO05D019087 5.3e-08 63.2 95 31.6
Medtr8g446580 Medicago truncatula HOM05D001572 ORTHO05D000733 5.3e-08 63.2 190 24.2
Medtr8g446610 Medicago truncatula HOM05D001572 ORTHO05D000733 5.3e-08 63.2 190 24.2
Sopen05g028230 Solanum pennellii HOM05D000006 ORTHO05D000001 5.3e-08 63.2 370 23.5
Medtr0163s0050 Medicago truncatula HOM05D002147 ORTHO05D000733 6.9e-08 62.8 218 24.3
Sopen08g019160 Solanum pennellii HOM05D000006 ORTHO05D000001 6.9e-08 62.8 370 23.8
Sopen05g025160 Solanum pennellii HOM05D000006 ORTHO05D000001 9.1e-08 62.4 370 23.8
Ca_24084_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.2e-07 62.0 238 23.9
Sopen01g022910 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-07 62.0 370 23.8
Sopen07g014880 Solanum pennellii HOM05D000006 ORTHO05D000695 1.2e-07 62.0 370 23.5
Sopen10g004600 Solanum pennellii HOM05D000006 ORTHO05D000001 1.2e-07 62.0 370 23.8
Ca_09573_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.5e-07 61.6 183 26.8
Ca_09576_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.5e-07 61.6 189 25.9
Sopen07g026820 Solanum pennellii HOM05D002432 ORTHO05D000695 1.5e-07 61.6 321 24.0
Sopen07g028560 Solanum pennellii HOM05D002432 ORTHO05D000695 1.5e-07 61.6 321 24.0
Sopen12g020400 Solanum pennellii HOM05D000006 ORTHO05D000001 1.5e-07 61.6 370 23.8
TPR.G40717 Trifolium pratense HOM05D001572 ORTHO05D000733 1.5e-07 61.6 155 27.1
Ca_19598_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-07 61.2 189 27.0
Ca_19845_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-07 61.2 196 25.5
Sopen10g005290 Solanum pennellii HOM05D000006 ORTHO05D000001 2.0e-07 61.2 370 23.5
Ca_12137_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.6e-07 60.8 192 26.6
Ca_14580_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 2.6e-07 60.8 216 23.6
Ca_02913_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 3.4e-07 60.5 196 23.5
Sopen05g018820 Solanum pennellii HOM05D000006 ORTHO05D000001 3.4e-07 60.5 241 25.7
Ca_06751_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 4.5e-07 60.1 211 24.6
Ca_27165_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 4.5e-07 60.1 196 26.0
Ca_19823_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.9e-07 59.7 195 27.2
Medtr8g469050 Medicago truncatula HOM05D001572 ORTHO05D000733 5.9e-07 59.7 190 22.6
Ca_27865_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 7.7e-07 59.3 192 25.5
Sopen09g019330 Solanum pennellii HOM05D000006 ORTHO05D000001 7.7e-07 59.3 261 26.1
Sopen11g023550 Solanum pennellii HOM05D000006 ORTHO05D000001 1.0e-06 58.9 295 24.7
Ca_11334_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.3e-06 58.5 180 27.8
Sopen01g016130 Solanum pennellii HOM05D000006 ORTHO05D000695 1.3e-06 58.5 263 23.6
Ca_23087_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 1.7e-06 58.2 197 25.4
Sopen07g004510 Solanum pennellii HOM05D000006 ORTHO05D000001 1.7e-06 58.2 370 23.2
VMungo1127G1907 Vigna mungo HOM05D011023 ORTHO05D002402 1.7e-06 58.2 215 27.4
Ca_28253_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.2e-06 57.8 179 25.7
VMungo0331G0817 Vigna mungo HOM05D011023 ORTHO05D002402 2.2e-06 57.8 145 31.7
Ca_04596_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.9e-06 57.4 179 26.3
Ca_11547_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.9e-06 57.4 192 26.0
Ca_03218_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 5.0e-06 56.6 131 30.5
Dinv25828 Davidia involucrata HOM05D008720 ORTHO05D011081 5.0e-06 56.6 166 27.7
Ca_00009_v3 Cicer arietinum L. HOM05D001572 ORTHO05D000733 8.5e-06 55.8 197 24.9
Ca_20125_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 8.5e-06 55.8 261 24.5


User provided reference genes

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