Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0059300 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.0e-134 483.4 246 100.0
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.4e-113 410.6 256 83.6
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.3e-109 398.7 290 74.1
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 7.4e-109 397.5 303 71.0
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.2e-108 396.0 296 72.0
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.9e-105 385.6 296 70.6
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.1e-101 373.6 287 70.4
Rhsim13G0113900 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-90 337.0 276 68.1
RhsimUnG0131900 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-87 327.0 250 71.2
Rhsim02G0144500 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-76 289.7 198 77.3
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.7e-71 272.7 165 85.5
vmacro07718 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.5e-48 196.4 235 48.9
Rhsim12G0050700 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.6e-39 167.2 143 62.2
vmacro08892 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.0e-38 162.5 242 43.8
Actinidia06690 Actinidia chinensis HOM05D000034 ORTHO05D000277 8.9e-38 161.4 283 33.9
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 2.0e-29 133.7 205 44.9
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.9e-28 129.0 269 31.6
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-25 120.9 294 28.2
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-25 120.9 294 28.2
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.5e-24 116.7 294 27.9
CSS0036595 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.5e-24 116.7 301 28.2
Actinidia04327 Actinidia chinensis HOM05D000034 ORTHO05D000037 1.8e-22 110.5 180 35.6
Actinidia35710 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.0e-21 107.1 171 36.8
CSS0024362 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 7.6e-21 105.1 311 26.0
CSS0008044 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.9e-21 104.8 309 24.9
CSS0015669 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 9.9e-21 104.8 311 26.0
CSS0010302 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.3e-20 104.4 311 26.0
Rhsim02G0110600 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.7e-20 104.0 305 25.9
Rhsim10G0097900 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.2e-20 103.6 283 28.6
CSS0033072 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.8e-20 102.8 287 26.1
CSS0040966 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.9e-20 102.4 299 26.4
CSS0016960 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.1e-19 101.3 311 24.8
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.4e-19 100.1 232 28.9
CSS0026213 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.2e-19 99.8 168 34.5
CSS0031455 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.2e-18 97.8 300 24.3
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-18 97.4 265 27.5
Migut.F01547 Erythranthe guttata HOM05D000034 ORTHO05D000277 1.3e-17 94.4 300 25.3
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-17 92.8 300 22.7
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.9e-17 92.8 270 25.6
Hma1.2p1_0286F.1_g113985 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.1e-17 92.4 304 23.4
vmacro06986 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.1e-17 92.4 283 24.4
CSS0042392 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 6.7e-17 92.0 309 24.3
Rhsim06G0087000 Rhododendron simsii HOM05D000034 ORTHO05D000277 8.7e-17 91.7 51 90.2
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-16 90.9 253 28.1
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-16 90.5 270 25.2
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-16 89.7 227 30.0
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.3e-16 89.4 290 23.8
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.3e-16 89.4 291 24.1
Hma1.2p1_0276F.1_g111440 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.6e-16 89.0 304 23.0
vmacro15090 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.6e-16 89.0 285 23.9
Hma1.2p1_0587F.1_g184020 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-16 88.6 277 26.0
Rhsim01G0151700 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.6e-15 87.4 58 72.4
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.6e-15 86.3 281 27.0
Actinidia34500 Actinidia chinensis HOM05D002514 ORTHO05D002761 3.6e-15 86.3 164 34.8
Hma1.2p1_0633F.1_g192570 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.6e-15 86.3 270 25.2
Hma1.2p1_0232F.1_g097920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-15 85.9 195 29.7
Hma1.2p1_0165F.1_g073390 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.2e-15 85.5 304 23.0
Hma1.2p1_0203F.1_g086660 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.2e-15 85.5 269 25.7
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 8.1e-15 85.1 290 22.4
Actinidia33028 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.8e-14 84.0 159 34.0
Hma1.2p1_0746F.1_g212360 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.8e-14 84.0 288 23.3
Hma1.2p1_0846F.1_g227800 Hydrangea macrophylla HOM05D000454 ORTHO05D000591 1.8e-14 84.0 288 23.3
Rhsim04G0178800 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.8e-14 84.0 272 25.7
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.4e-14 83.6 281 26.7
SGA_v2.0_scaffold13G06465 Striga asiatica HOM05D000034 ORTHO05D000277 2.4e-14 83.6 288 23.3
Dinv02446 Davidia involucrata HOM05D000034 ORTHO05D000277 1.2e-13 81.3 283 25.1
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 2.0e-13 80.5 187 27.3
Hma1.2p1_0388F.1_g142330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-13 80.5 290 24.8
Rhsim10G0122700 Rhododendron simsii HOM05D000034 ORTHO05D000277 4.5e-13 79.3 273 24.5
SalBow2G2676 Salvia bowleyana HOM05D009908 ORTHO05D012008 4.5e-13 79.3 183 29.0
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 5.8e-13 79.0 186 26.9
Actinidia03349 Actinidia chinensis HOM05D000034 ORTHO05D000277 7.6e-13 78.6 150 32.7
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 7.6e-13 78.6 206 28.2
Hma1.2p1_0046F.1_g026820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-12 77.4 246 26.8
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 1.7e-12 77.4 186 26.9
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 2.9e-12 76.6 288 24.7
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 3.8e-12 76.3 288 25.3
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 4.9e-12 75.9 305 22.0
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 6.4e-12 75.5 271 23.2
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 1.9e-11 73.9 268 24.6
CSS0011764 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.5e-11 72.4 143 32.9
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 5.5e-11 72.4 255 25.1
FAN20G0414 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.3e-11 71.6 232 27.2
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 2.7e-10 70.1 290 21.4
CSS0046359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 3.5e-10 69.7 92 37.0
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 4.6e-10 69.3 280 22.5
FAN12G3067 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.0e-09 68.2 270 25.2
CSS0021233 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.3e-09 67.8 262 23.3
SGA_v2.0_scaffold68G22817 Striga asiatica HOM05D009707 ORTHO05D010215 3.0e-09 66.6 257 24.9
TPR.G25081 Trifolium pratense HOM05D000034 ORTHO05D000277 3.0e-09 66.6 202 26.7
CANSAT11G0741 Cannabis sativa HOM05D000034 ORTHO05D000277 5.1e-09 65.9 276 24.6
Hma1.2p1_0386F.1_g141750 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 5.1e-09 65.9 278 23.4
Lj5g0006139 Lotus japonicus HOM05D000034 ORTHO05D000277 8.7e-09 65.1 282 23.4
Hma1.2p1_0170F.1_g074960 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 1.1e-08 64.7 290 22.8
Hma1.2p1_1104F.1_g257520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-08 64.3 290 23.4
Rhsim12G0012100 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.5e-08 64.3 96 35.4
FvH4_7g00320 Fragaria vesca HOM05D000034 ORTHO05D000277 2.5e-08 63.5 274 24.1
Actinidia06423 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.3e-08 63.2 315 21.6
CANSAT21G0305 Cannabis sativa HOM05D000034 ORTHO05D000277 5.6e-08 62.4 276 24.3
Dinv07862 Davidia involucrata HOM05D000034 ORTHO05D000277 5.6e-08 62.4 175 26.9
CANSAT25G0805 Cannabis sativa HOM05D000034 ORTHO05D000277 7.4e-08 62.0 276 23.6
DCAR_011368 Daucus carota HOM05D001651 ORTHO05D000277 7.4e-08 62.0 169 30.2
DCAR_011369 Daucus carota HOM05D001651 ORTHO05D000277 7.4e-08 62.0 169 30.2
DCAR_018898 Daucus carota HOM05D001651 ORTHO05D000277 7.4e-08 62.0 169 30.2
Rhsim03G0059900 Rhododendron simsii HOM05D000034 ORTHO05D000037 9.6e-08 61.6 281 22.8
Actinidia29943 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.6e-07 60.8 130 31.5
Hma1.2p1_0480F.1_g161830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.1e-07 60.5 236 23.7
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 2.1e-07 60.5 202 22.3
Actinidia29814 Actinidia chinensis HOM05D004347 ORTHO05D005270 2.8e-07 60.1 134 29.9
Rhsim01G0279200 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.8e-07 60.1 281 22.4
SGA_v2.0_scaffold464G52000 Striga asiatica HOM05D000034 ORTHO05D000037 2.8e-07 60.1 247 23.9
SGA_v2.0_scaffold113G31702 Striga asiatica HOM05D012189 ORTHO05D000277 3.7e-07 59.7 238 23.5
SGA_v2.0_scaffold73G24466 Striga asiatica HOM05D009666 ORTHO05D000277 3.7e-07 59.7 163 26.4
vmacro10760 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 3.7e-07 59.7 210 27.1
Hma1.2p1_0022F.1_g014790 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-07 59.3 251 19.5
Lj1g0021510 Lotus japonicus HOM05D000034 ORTHO05D000277 4.8e-07 59.3 176 27.3
Actinidia04330 Actinidia chinensis HOM05D009692 ORTHO05D011920 6.2e-07 58.9 238 22.7
Hma1.2p1_0529F.1_g173280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.2e-07 58.9 175 25.7
Hma1.2p1_2091F.1_g313856 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 6.2e-07 58.9 158 27.2
Actinidia17901 Actinidia chinensis HOM05D000034 ORTHO05D000277 8.1e-07 58.5 96 38.5
Actinidia09887 Actinidia chinensis HOM05D000034 ORTHO05D000037 1.1e-06 58.2 318 22.3
Hma1.2p1_0096F.1_g047690 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-06 58.2 245 22.9
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 1.1e-06 58.2 225 22.2
Dinv06216 Davidia involucrata HOM05D000034 ORTHO05D000277 1.4e-06 57.8 185 26.5
Dinv38790 Davidia involucrata HOM05D000034 ORTHO05D000277 1.4e-06 57.8 178 29.8
SGA_v2.0_scaffold258G45776 Striga asiatica HOM05D012189 ORTHO05D000277 1.4e-06 57.8 176 27.8
Hma1.2p1_1398F.1_g280820 Hydrangea macrophylla HOM05D000034 ORTHO05D000277 2.4e-06 57.0 175 25.7
Actinidia28480 Actinidia chinensis HOM05D000830 ORTHO05D003205 3.1e-06 56.6 78 35.9
Dinv12704 Davidia involucrata HOM05D000034 ORTHO05D000277 3.1e-06 56.6 219 24.7
Hma1.2p1_0189F.1_g082820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.0e-06 56.2 180 24.4
Actinidia00035 Actinidia chinensis HOM05D000034 ORTHO05D000037 5.3e-06 55.8 318 22.0
Actinidia38160 Actinidia chinensis HOM05D000034 ORTHO05D000277 5.3e-06 55.8 158 25.9
Dinv18323 Davidia involucrata HOM05D000034 ORTHO05D000277 5.3e-06 55.8 133 28.6
Lj1g0019892 Lotus japonicus HOM05D000034 ORTHO05D000277 5.3e-06 55.8 276 22.1
Actinidia16895 Actinidia chinensis HOM05D000034 ORTHO05D000277 6.9e-06 55.5 309 21.0
CANSAT64G1464 Cannabis sativa HOM05D000034 ORTHO05D000277 6.9e-06 55.5 163 27.6
FAN28G1917 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.9e-06 55.5 288 22.2
Thecc.05G132700 Theobroma cacao HOM05D001651 ORTHO05D000277 6.9e-06 55.5 200 26.5
Actinidia05861 Actinidia chinensis HOM05D009692 ORTHO05D011920 9.0e-06 55.1 107 29.9
Dinv20295 Davidia involucrata HOM05D002072 ORTHO05D001634 9.0e-06 55.1 44 50.0


User provided reference genes

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