Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0051600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-31 139.0 67 100.0
Rhsim01G0069500 Rhododendron simsii HOM05D003046 ORTHO05D003428 2.1e-13 78.6 44 84.1
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 7.9e-13 76.6 44 84.1
RhsimUnG0155100 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.7e-10 67.8 58 58.6
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.0e-09 64.3 52 57.7
CSS0010149 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-09 63.2 62 48.4
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-08 62.8 62 48.4
RhsimUnG0053200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-08 62.8 56 55.4
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.5e-08 62.4 63 44.4
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.5e-08 60.8 62 46.8
Rhsim09G0012500 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.5e-08 60.8 53 47.2
PSO541G2151 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-08 60.5 53 49.1
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.8e-08 60.5 52 51.9
Rhsim13G0172400 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.8e-08 60.5 58 50.0
Prupe.3G120300 Prunus persica HOM05D000003 ORTHO05D000004 7.6e-08 60.1 57 42.1
Prupe.5G070700 Prunus persica HOM05D000003 ORTHO05D000004 1.0e-07 59.7 54 46.3
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.0e-07 59.7 57 47.4
Rhsim02G0110700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-07 59.3 60 48.3
Rhsim04G0047200 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-07 58.5 52 50.0
RhsimUnG0169300 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-07 58.5 54 51.9
CSS0003312 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-07 58.2 56 50.0
CSS0004848 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-07 58.2 56 50.0
PSO063G2458 Papaver somniferum HOM05D000003 ORTHO05D000006 2.9e-07 58.2 51 51.0
PSO210G6361 Papaver somniferum HOM05D000003 ORTHO05D000004 2.9e-07 58.2 54 51.9
Rhsim05G0112800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.9e-07 58.2 55 47.3
Aqoxy5G01559 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.8e-07 57.8 57 49.1
PSO339G3346 Papaver somniferum HOM05D000003 ORTHO05D000004 3.8e-07 57.8 53 49.1
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.8e-07 57.8 52 51.9
CANSAT11G1393 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-07 57.4 49 55.1
Prupe.6G087800 Prunus persica HOM05D000003 ORTHO05D000004 4.9e-07 57.4 55 41.8
PSO386G0019 Papaver somniferum HOM05D000003 ORTHO05D000006 6.5e-07 57.0 50 48.0
Rhsim08G0131400 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.5e-07 57.0 48 56.2
CSS0044575 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 56.2 56 44.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.1e-06 56.2 54 46.3
CSS0033144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-06 55.8 62 43.5
CSS0033977 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-06 55.8 62 45.2
FvH4_5g27366 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-06 55.8 63 44.4
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.9e-06 55.5 62 43.5
Aa31sc52G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-06 55.1 60 45.0
CANSAT21G0668 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-06 55.1 55 47.3
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 2.5e-06 55.1 53 49.1
Rhsim12G0010600 Rhododendron simsii HOM05D018264 ORTHO05D018096 2.5e-06 55.1 48 54.2
Aqoxy1G01582 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.2e-06 54.7 54 46.3
PSO384G2093 Papaver somniferum HOM05D000003 ORTHO05D000004 3.2e-06 54.7 41 63.4
Rhsim09G0064700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.2e-06 54.7 61 45.9
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.2e-06 54.7 54 46.3
Aqoxy4G02040 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.2e-06 54.3 52 48.1
CSS0018124 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-06 54.3 50 48.0
Prupe.7G008600 Prunus persica HOM05D000003 ORTHO05D000004 4.2e-06 54.3 49 49.0
Prupe.8G025100 Prunus persica HOM05D000003 ORTHO05D000004 4.2e-06 54.3 52 42.3
CANSAT78G1838 Cannabis sativa HOM05D000003 ORTHO05D000006 5.5e-06 53.9 49 53.1
CANSAT80G2177 Cannabis sativa HOM05D000003 ORTHO05D009135 5.5e-06 53.9 54 46.3
FvH4_6g23032 Fragaria vesca HOM05D000003 ORTHO05D017879 5.5e-06 53.9 51 49.0
CSS0018353 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.1e-06 53.5 62 41.9
CANSAT11G0304 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-06 53.5 50 48.0
PSO133G0054 Papaver somniferum HOM05D000003 ORTHO05D000004 7.1e-06 53.5 49 46.9
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.1e-06 53.5 58 46.6
Rhsim11G0009900 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.1e-06 53.5 50 46.0
RcHm_v2.0_Chr7g0210901 Rosa chinensis HOM05D000003 ORTHO05D000004 7.1e-06 53.5 55 43.6
TAR034G0005 Trochodendron aralioides HOM05D000003 ORTHO05D000004 7.1e-06 53.5 60 46.7
Aqoxy7G02755 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.3e-06 53.1 49 53.1
CANSAT56G1417 Cannabis sativa HOM05D000003 ORTHO05D000004 9.3e-06 53.1 51 49.0
PSO782G2301 Papaver somniferum HOM05D000003 ORTHO05D000004 9.3e-06 53.1 49 49.0
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 9.3e-06 53.1 57 50.9


User provided reference genes

Program Settings