Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0048800 Rhododendron simsii HOM05D003458 ORTHO05D003854 5.7e-62 240.7 122 100.0
Rhsim09G0128500 Rhododendron simsii HOM05D003458 ORTHO05D003854 1.8e-31 139.4 74 94.6
Rhsim10G0005600 Rhododendron simsii HOM05D003458 ORTHO05D003854 2.4e-31 139.0 72 97.2
RhsimUnG0161600 Rhododendron simsii HOM05D003458 ORTHO05D003854 1.5e-30 136.3 72 95.8
Rhsim12G0186500 Rhododendron simsii HOM05D003458 ORTHO05D003854 1.4e-23 113.2 71 87.3
Rhsim12G0184600 Rhododendron simsii HOM05D003458 ORTHO05D003854 5.3e-23 111.3 71 85.9
vmacro16847 Vaccinium macrocarpon HOM05D003458 ORTHO05D003854 1.2e-19 100.1 75 74.7
vmacro16846 Vaccinium macrocarpon HOM05D003458 ORTHO05D003854 7.9e-19 97.4 75 73.3
Actinidia18254 Actinidia chinensis HOM05D003458 ORTHO05D003854 4.3e-09 65.1 74 58.1
CSS0014583 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 7.4e-09 64.3 77 51.9
Hma1.2p1_0109F.1_g052660 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 7.4e-09 64.3 72 51.4
CSS0041792 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 9.6e-09 63.9 76 52.6
CSS0042256 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 9.6e-09 63.9 76 52.6
COL.COLO4_26747 Corchorus olitorius HOM05D003458 ORTHO05D003854 1.6e-08 63.2 71 52.1
ECA232G4261 Erigeron canadensis HOM05D003458 ORTHO05D003854 1.6e-08 63.2 66 53.0
Duzib235G0945 Durio zibethinus HOM05D003458 ORTHO05D003854 2.1e-08 62.8 71 49.3
Peaxi162Scf00207g00438 Petunia axillaris HOM05D003458 ORTHO05D003854 2.1e-08 62.8 75 50.7
VMungo0331G1722 Vigna mungo HOM05D003458 ORTHO05D003854 2.1e-08 62.8 70 50.0
CSS0012292 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 2.8e-08 62.4 75 52.0
Gohir.A05G118300 Gossypium hirsutum HOM05D003458 ORTHO05D003854 2.8e-08 62.4 71 52.1
Manes.04G101600 Manihot esculenta HOM05D003458 ORTHO05D003854 2.8e-08 62.4 93 43.0
Duzib235G1193 Durio zibethinus HOM05D003458 ORTHO05D003854 3.7e-08 62.0 71 50.7
Lsat_1_v5_gn_4_86780 Lactuca sativa HOM05D003458 ORTHO05D003854 4.8e-08 61.6 55 61.8
PGSC0003DMG400014210 Solanum tuberosum HOM05D003458 ORTHO05D003854 6.2e-08 61.2 78 50.0
Actinidia08942 Actinidia chinensis HOM05D000470 ORTHO05D003854 8.1e-08 60.8 71 50.7
Gohir.D05G119000 Gossypium hirsutum HOM05D003458 ORTHO05D003854 8.1e-08 60.8 71 50.7
Gorai.009G122900 Gossypium raimondii HOM05D003458 ORTHO05D003854 8.1e-08 60.8 71 50.7
TWI12G1059 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 8.1e-08 60.8 74 47.3
Dinv21418 Davidia involucrata HOM05D003458 ORTHO05D003854 1.4e-07 60.1 75 57.3
FAN14G3070 Fragaria x ananassa HOM05D003458 ORTHO05D003854 1.4e-07 60.1 73 56.2
FvH4_6g28480 Fragaria vesca HOM05D003458 ORTHO05D003854 1.8e-07 59.7 74 55.4
GSVIVG01015991001 Vitis vinifera HOM05D003458 ORTHO05D003854 1.8e-07 59.7 69 49.3
CAN.G407.1 Capsicum annuum HOM05D003458 ORTHO05D003854 3.1e-07 58.9 78 47.4
Lj3g0007846 Lotus japonicus HOM05D003458 ORTHO05D003854 3.1e-07 58.9 71 47.9
Oeu004558.1 Olea europaea HOM05D003458 ORTHO05D003854 3.1e-07 58.9 64 51.6
Actinidia25473 Actinidia chinensis HOM05D003458 ORTHO05D003854 4.0e-07 58.5 78 52.6
Cc04_g05210 Coffea canephora HOM05D003458 ORTHO05D003854 4.0e-07 58.5 76 51.3
Duzib160G0069 Durio zibethinus HOM05D003458 ORTHO05D003854 4.0e-07 58.5 71 49.3
Solyc03g117590.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 4.0e-07 58.5 66 50.0
TPR.G3351 Trifolium pratense HOM05D003458 ORTHO05D003854 4.0e-07 58.5 85 45.9
RcHm_v2.0_Chr2g0132701 Rosa chinensis HOM05D003458 ORTHO05D003854 5.3e-07 58.2 74 54.1
Sopen03g036500 Solanum pennellii HOM05D003458 ORTHO05D003854 6.9e-07 57.8 70 51.4
Dinv23277 Davidia involucrata HOM05D003458 ORTHO05D003854 9.0e-07 57.4 76 46.1
Glyma.07G021800 Glycine max HOM05D003458 ORTHO05D003854 9.0e-07 57.4 71 47.9
TAR383G0585 Trochodendron aralioides HOM05D003458 ORTHO05D003854 9.0e-07 57.4 74 55.4
Atru.chr1.2783 Acer truncatum HOM05D003458 ORTHO05D003854 1.2e-06 57.0 72 50.0
MSTRG.11188 Avicennia marina HOM05D003458 ORTHO05D003854 1.2e-06 57.0 74 52.7
MD17G1224600 Malus domestica HOM05D003458 ORTHO05D003854 1.2e-06 57.0 65 53.8
PGSC0003DMG400028488 Solanum tuberosum HOM05D003458 ORTHO05D003854 1.2e-06 57.0 79 49.4
Cpa.g.sc362.2 Carica papaya HOM05D003458 ORTHO05D003854 1.5e-06 56.6 75 48.0
CiPaw.02G162800 Carya illinoinensis HOM05D003458 ORTHO05D003854 1.5e-06 56.6 71 46.5
Eucgr.J03121 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.5e-06 56.6 75 49.3
Solyc06g068500.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 1.5e-06 56.6 79 48.1
Nitab4.5_0002700g0120 Nicotiana tabacum HOM05D003458 ORTHO05D003854 2.0e-06 56.2 78 48.7
Nitab4.5_0009867g0010 Nicotiana tabacum HOM05D003458 ORTHO05D003854 2.0e-06 56.2 78 48.7
PGR031G3767 Punica granatum HOM05D003458 ORTHO05D003854 2.0e-06 56.2 80 41.2
PGR037G0008 Punica granatum HOM05D003458 ORTHO05D003854 2.0e-06 56.2 80 41.2
Ca_06645_v3 Cicer arietinum L. HOM05D003458 ORTHO05D003854 2.6e-06 55.8 72 43.1
HanXRQChr09g0274111 Helianthus annuus HOM05D003458 ORTHO05D003854 2.6e-06 55.8 68 50.0
Psat7g263240 Pisum sativum HOM05D003458 ORTHO05D003854 2.6e-06 55.8 72 44.4
MELO3C026732.2 Cucumis melo HOM05D003458 ORTHO05D003854 3.4e-06 55.5 56 58.9
FAN05G3986 Fragaria x ananassa HOM05D003458 ORTHO05D003854 3.4e-06 55.5 72 51.4
Thecc.06G043800 Theobroma cacao HOM05D003458 ORTHO05D003854 3.4e-06 55.5 71 47.9
FAN02G0674 Fragaria x ananassa HOM05D003458 ORTHO05D003854 4.5e-06 55.1 73 50.7
MSTRG.9399 Avicennia marina HOM05D003458 ORTHO05D003854 5.8e-06 54.7 76 48.7
CsaV3_3G032730 Cucumis sativus L. HOM05D003458 ORTHO05D003854 5.8e-06 54.7 73 46.6
Lsat_1_v5_gn_4_86800 Lactuca sativa HOM05D003458 ORTHO05D003854 5.8e-06 54.7 62 53.2
TWI18G0048 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 7.6e-06 54.3 64 46.9
Migut.I00685 Erythranthe guttata HOM05D003458 ORTHO05D003854 1.0e-05 53.9 39 71.8
Eucgr.F03977 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.0e-05 53.9 78 47.4
MD09G1225800 Malus domestica HOM05D003458 ORTHO05D003854 1.0e-05 53.9 66 53.0
Manes.11G068500 Manihot esculenta HOM05D003458 ORTHO05D003854 1.0e-05 53.9 79 46.8
Medtr4g007300 Medicago truncatula HOM05D003458 ORTHO05D003854 1.0e-05 53.9 75 45.3
Sed0021285 Sechium edule HOM05D003458 ORTHO05D003854 1.0e-05 53.9 74 48.6


User provided reference genes

Program Settings