Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0043100 Rhododendron simsii HOM05D000429 ORTHO05D000352 5.0e-99 364.4 177 100.0
Rhsim04G0047900 Rhododendron simsii HOM05D000429 ORTHO05D000352 1.1e-37 160.6 85 91.8
Rhsim04G0229300 Rhododendron simsii HOM05D000429 ORTHO05D000352 1.1e-37 160.6 85 94.1
Rhsim03G0108800 Rhododendron simsii HOM05D000429 ORTHO05D000352 2.4e-32 142.9 107 70.1
Rhsim07G0161900 Rhododendron simsii HOM05D000429 ORTHO05D000352 7.9e-20 101.3 87 64.4
vmacro22445 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 6.1e-12 75.1 68 45.6
TWI77G0887 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.5e-10 70.5 65 53.8
Rhsim06G0145800 Rhododendron simsii HOM05D000429 ORTHO05D000352 2.5e-10 69.7 39 84.6
TWI18G1081 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.3e-10 69.3 65 52.3
TWI77G0384 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.3e-10 68.9 67 55.2
TWI14G1210 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.7e-10 68.6 65 52.3
vmacro22814 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 9.7e-10 67.8 106 34.9
vmacro12124 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.3e-09 67.4 82 41.5
CSS0011981 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.6e-09 67.0 91 40.7
vmacro03782 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro04112 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro04113 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro04163 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro05736 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro10795 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro12530 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
vmacro12642 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.2e-09 66.6 74 45.9
CSS0039024 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.8e-09 66.2 92 42.4
vmacro05344 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-09 66.2 82 41.5
vmacro19814 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-09 66.2 82 41.5
CSS0024310 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.3e-09 65.1 75 45.3
CSS0026036 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.3e-09 65.1 88 40.9
CSS0013021 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 8.2e-09 64.7 75 45.3
CSS0025589 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 8.2e-09 64.7 75 45.3
CSS0044602 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 8.2e-09 64.7 75 45.3
vmacro12133 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.1e-08 64.3 81 40.7
CSS0027242 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.4e-08 63.9 91 39.6
CSS0049794 Camellia sinensis var. sinensis HOM05D013752 ORTHO05D000352 1.4e-08 63.9 89 39.3
vmacro12925 Vaccinium macrocarpon HOM05D000382 ORTHO05D000352 1.4e-08 63.9 74 43.2
vmacro12970 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.4e-08 63.9 82 40.2
CSS0016775 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.8e-08 63.5 82 41.5
TWI23G0198 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.8e-08 63.5 65 47.7
CSS0043892 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.4e-08 63.2 75 44.0
CSS0011394 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.1e-08 62.8 75 44.0
CSS0037409 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.1e-08 62.8 76 42.1
CSS0010738 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.1e-08 62.4 75 44.0
CSS0048813 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 9.0e-08 61.2 76 42.1
vmacro08897 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.5e-07 60.5 74 40.5
TWI31G0564 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.0e-07 60.1 52 51.9
TWI31G0293 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.4e-07 59.3 65 46.2
CSS0027013 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.9e-07 58.5 87 32.2
MBI17_g19936_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 7.7e-07 58.2 70 42.9
DCAR_031921 Daucus carota HOM05D000047 ORTHO05D000044 1.0e-06 57.8 67 38.8
CSS0047551 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.7e-06 57.0 76 40.8
TWI38G1939 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.7e-06 57.0 52 48.1
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.9e-06 56.2 56 46.4
BcaC06g35018 Brassica carinata HOM05D008499 ORTHO05D000352 3.8e-06 55.8 46 54.3
CSS0001713 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.8e-06 55.8 45 53.3
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 3.8e-06 55.8 68 41.2
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 3.8e-06 55.8 99 34.3
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 3.8e-06 55.8 60 45.0
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.0e-06 55.5 56 46.4
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 5.0e-06 55.5 111 34.2
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 5.0e-06 55.5 99 33.3
COL.COLO4_24943 Corchorus olitorius HOM05D000429 ORTHO05D000880 5.0e-06 55.5 90 31.1
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 6.5e-06 55.1 85 36.5
CANSAT01G1463 Cannabis sativa HOM05D000429 ORTHO05D000352 8.5e-06 54.7 99 33.3


User provided reference genes

Program Settings