Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.2e-113 411.4 210 100.0
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.2e-44 182.2 94 100.0
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.1e-39 166.0 96 87.5
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.8e-32 142.9 91 76.9
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 5.0e-21 105.5 83 67.5
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.9e-18 95.9 86 61.6
Rhsim07G0132600 Rhododendron simsii HOM05D005503 ORTHO05D340293 2.0e-17 93.6 53 83.0
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.7e-16 89.4 98 51.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 5.5e-12 75.5 96 50.0
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 6.7e-10 68.6 90 50.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 6.7e-10 68.6 96 40.6
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.5e-09 67.4 93 46.2
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.5e-09 67.4 60 58.3
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 2.0e-09 67.0 96 43.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 3.3e-09 66.2 98 44.9
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 7.4e-09 65.1 97 41.2
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 9.7e-09 64.7 86 45.3
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 9.7e-09 64.7 56 64.3
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.7e-09 64.7 36 86.1
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.7e-09 64.7 56 64.3
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.7e-08 63.9 84 42.9
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.7e-08 63.9 82 43.9
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.2e-08 63.5 80 45.0
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 2.8e-08 63.2 78 44.9
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 3.7e-08 62.8 36 83.3
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 3.7e-08 62.8 36 83.3
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 3.7e-08 62.8 92 45.7
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.8e-08 62.4 57 61.4
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 4.8e-08 62.4 36 80.6
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.8e-08 62.4 55 65.5
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.3e-08 62.0 36 83.3
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 6.3e-08 62.0 61 57.4
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 6.3e-08 62.0 61 57.4
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 6.3e-08 62.0 69 50.7
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 8.2e-08 61.6 81 44.4
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.4e-07 60.8 81 45.7
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.4e-07 60.8 98 38.8
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.4e-07 60.8 86 45.3
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.4e-07 60.8 60 55.0
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.4e-07 60.8 90 42.2
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.4e-07 60.1 94 40.4
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 2.4e-07 60.1 87 43.7
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.4e-07 60.1 80 41.2
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 3.1e-07 59.7 94 38.3
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 4.1e-07 59.3 88 38.6
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 4.1e-07 59.3 98 39.8
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.1e-07 59.3 72 47.2
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 5.3e-07 58.9 92 40.2
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 5.3e-07 58.9 87 44.8
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 5.3e-07 58.9 42 66.7
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 5.3e-07 58.9 61 54.1
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 9.1e-07 58.2 36 72.2
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 9.1e-07 58.2 80 45.0
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 9.1e-07 58.2 91 38.5
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.2e-06 57.8 76 43.4
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.0e-06 57.0 85 44.7
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 2.0e-06 57.0 93 44.1
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 2.0e-06 57.0 86 44.2
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 2.6e-06 56.6 50 58.0
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.6e-06 56.6 31 87.1
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.6e-06 56.6 73 47.9
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 3.5e-06 56.2 36 75.0
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 3.5e-06 56.2 97 35.1
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 4.5e-06 55.8 32 81.2
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.5e-06 55.8 47 55.3
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.5e-06 55.8 47 55.3
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.5e-06 55.8 47 55.3
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 7.7e-06 55.1 89 39.3


User provided reference genes

Program Settings