Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0032400 Rhododendron simsii HOM05D002115 ORTHO05D014537 7.1e-76 287.3 163 100.0
Rhsim04G0032200 Rhododendron simsii HOM05D002115 ORTHO05D002263 2.5e-36 156.0 83 92.8
Dinv21343 Davidia involucrata HOM05D002115 ORTHO05D002263 2.6e-33 146.0 83 86.7
Dinv26636 Davidia involucrata HOM05D002115 ORTHO05D002263 2.8e-32 142.5 81 86.4
Lj8A139T62 Lonicera japonica HOM05D002115 ORTHO05D002263 1.4e-31 140.2 83 81.9
TAR627G0134 Trochodendron aralioides HOM05D002115 ORTHO05D002263 2.4e-31 139.4 84 79.8
CSS0007528 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 3.1e-31 139.0 79 87.3
CSS0039958 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 3.1e-31 139.0 79 87.3
Cc05_g09970 Coffea canephora HOM05D002115 ORTHO05D002263 7.0e-31 137.9 82 81.7
HanXRQChr09g0257501 Helianthus annuus HOM05D002115 ORTHO05D002263 7.0e-31 137.9 83 81.9
SalBow7G3109 Salvia bowleyana HOM05D002115 ORTHO05D002263 2.0e-30 136.3 83 83.1
SalBow7G3339 Salvia bowleyana HOM05D002115 ORTHO05D002263 2.0e-30 136.3 83 83.1
Nn3g20355 Nelumbo nucifera HOM05D002115 ORTHO05D002263 5.9e-30 134.8 81 80.2
Nitab4.5_0004166g0030 Nicotiana tabacum HOM05D002115 ORTHO05D002263 7.7e-30 134.4 83 77.1
TAR629G1494 Trochodendron aralioides HOM05D002115 ORTHO05D002263 1.0e-29 134.0 84 78.6
Actinidia18815 Actinidia chinensis HOM05D002115 ORTHO05D002263 1.3e-29 133.7 83 79.5
Actinidia35186 Actinidia chinensis HOM05D002115 ORTHO05D002263 2.3e-29 132.9 82 78.0
GSVIVG01021542001 Vitis vinifera HOM05D002115 ORTHO05D002263 2.3e-29 132.9 84 77.4
HanXRQChr11g0330041 Helianthus annuus HOM05D002115 ORTHO05D002263 3.8e-29 132.1 84 79.8
Oeu012708.1 Olea europaea HOM05D002115 ORTHO05D014537 5.0e-29 131.7 84 77.4
CSS0006096 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 6.6e-29 131.3 83 80.7
CSS0012321 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 6.6e-29 131.3 83 80.7
Lsat_1_v5_gn_7_99441 Lactuca sativa HOM05D002115 ORTHO05D002263 8.6e-29 131.0 80 80.0
Ciclev10014165m.g Citrus clementina HOM05D002115 ORTHO05D002263 1.9e-28 129.8 84 73.8
DCAR_019646 Daucus carota HOM05D002115 ORTHO05D002263 2.5e-28 129.4 83 77.1
ECA236G4492 Erigeron canadensis HOM05D002115 ORTHO05D002263 2.5e-28 129.4 84 77.4
PSO675G7753 Papaver somniferum HOM05D002115 ORTHO05D002263 3.3e-28 129.0 112 62.5
SalBow1G2963 Salvia bowleyana HOM05D002115 ORTHO05D014537 3.3e-28 129.0 84 81.0
SalBow7G1121 Salvia bowleyana HOM05D002115 ORTHO05D014537 3.3e-28 129.0 84 81.0
SalBow7G4384 Salvia bowleyana HOM05D002115 ORTHO05D014537 3.3e-28 129.0 84 81.0
SalBow7G4420 Salvia bowleyana HOM05D002115 ORTHO05D014537 3.3e-28 129.0 84 81.0
Thecc.06G145100 Theobroma cacao HOM05D002115 ORTHO05D002263 4.2e-28 128.6 84 75.0
Peaxi162Scf00111g00532 Petunia axillaris HOM05D002115 ORTHO05D002263 5.5e-28 128.3 83 73.5
AUR62041253 Chenopodium quinoa HOM05D002115 ORTHO05D002263 7.2e-28 127.9 83 75.9
AUR62042840 Chenopodium quinoa HOM05D002115 ORTHO05D002263 7.2e-28 127.9 83 75.9
ECA240G2296 Erigeron canadensis HOM05D002115 ORTHO05D002263 7.2e-28 127.9 83 74.7
PSO541G2268 Papaver somniferum HOM05D002115 ORTHO05D002263 7.2e-28 127.9 82 75.6
TWI73G1220 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 7.2e-28 127.9 86 73.3
Solyc07g056030.3 Solanum lycopersicum HOM05D002115 ORTHO05D002263 9.5e-28 127.5 83 74.7
PGSC0003DMG400031100 Solanum tuberosum HOM05D002115 ORTHO05D002263 9.5e-28 127.5 83 74.7
Ah.06g187380 Amaranthus hybridus HOM05D002115 ORTHO05D002263 2.1e-27 126.3 83 74.7
EL10Ac4g08514 Beta vulgaris HOM05D002115 ORTHO05D002263 2.1e-27 126.3 83 75.9
CiPaw.10G089000 Carya illinoinensis HOM05D002115 ORTHO05D002263 2.1e-27 126.3 84 75.0
Gohir.A10G043600 Gossypium hirsutum HOM05D002115 ORTHO05D002263 2.1e-27 126.3 84 72.6
Gohir.D10G044800 Gossypium hirsutum HOM05D002115 ORTHO05D002263 2.1e-27 126.3 84 72.6
Gorai.011G047800 Gossypium raimondii HOM05D002115 ORTHO05D002263 2.1e-27 126.3 84 72.6
Aqoxy4G00083 Aquilegia oxysepala HOM05D002115 ORTHO05D002263 2.8e-27 125.9 84 72.6
Hund10312 Selenicereus undatus HOM05D002115 ORTHO05D002263 3.6e-27 125.6 83 74.7
Duzib192G0494 Durio zibethinus HOM05D002115 ORTHO05D002263 6.1e-27 124.8 84 72.6
Duzib235G1503 Durio zibethinus HOM05D002115 ORTHO05D002263 6.1e-27 124.8 84 72.6
MSTRG.14265 Avicennia marina HOM05D002115 ORTHO05D002263 8.0e-27 124.4 83 74.7
TWI09G0160 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 1.0e-26 124.0 89 70.8
CAN.G585.4 Capsicum annuum HOM05D002115 ORTHO05D002263 1.8e-26 123.2 84 73.8
CANSAT35G1551 Cannabis sativa HOM05D002115 ORTHO05D002263 2.3e-26 122.9 84 72.6
Lsat_1_v5_gn_9_103361 Lactuca sativa HOM05D002115 ORTHO05D002263 3.0e-26 122.5 87 74.7
QL05p055199 Quercus lobata HOM05D002115 ORTHO05D002263 3.0e-26 122.5 83 73.5
SGA_v2.0_scaffold130G34243 Striga asiatica HOM05D002115 ORTHO05D002263 3.0e-26 122.5 83 72.3
COL.COLO4_31017 Corchorus olitorius HOM05D002115 ORTHO05D002263 6.8e-26 121.3 84 75.0
Lsat_1_v5_gn_1_28321 Lactuca sativa HOM05D002115 ORTHO05D002263 8.9e-26 120.9 85 75.3
Gohir.D06G144500 Gossypium hirsutum HOM05D002115 ORTHO05D002263 1.2e-25 120.6 84 69.0
Gorai.010G168200 Gossypium raimondii HOM05D002115 ORTHO05D002263 1.2e-25 120.6 84 69.0
Migut.H02057 Erythranthe guttata HOM05D002115 ORTHO05D002263 1.5e-25 120.2 76 75.0
Haze_05655 Corylus avellana HOM05D002115 ORTHO05D002263 2.6e-25 119.4 83 73.5
DCAR_013808 Daucus carota HOM05D002115 ORTHO05D002263 2.6e-25 119.4 81 69.1
Gohir.A06G139800 Gossypium hirsutum HOM05D002115 ORTHO05D002263 4.4e-25 118.6 84 67.9
TWI53G2036 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 4.4e-25 118.6 84 69.0
Duzib160G0249 Durio zibethinus HOM05D002115 ORTHO05D002263 7.5e-25 117.9 84 69.0
MBI18_g11225_MAGBIO Magnolia biondii HOM05D002115 ORTHO05D002263 1.3e-24 117.1 83 71.1
CiPaw.09G120200 Carya illinoinensis HOM05D002115 ORTHO05D002263 2.2e-24 116.3 84 69.0
Lalb_Chr07g0187511 Lupinus albus HOM05D002115 ORTHO05D002263 2.2e-24 116.3 84 69.0
Lsat_1_v5_gn_4_159580 Lactuca sativa HOM05D002115 ORTHO05D014537 2.8e-24 115.9 85 68.2
Medtr8g079465 Medicago truncatula HOM05D002115 ORTHO05D002263 3.7e-24 115.5 86 66.3
Glyma.08G099500 Glycine max HOM05D002115 ORTHO05D002263 8.3e-24 114.4 84 70.2
TPR.G9578 Trifolium pratense HOM05D002115 ORTHO05D002263 1.1e-23 114.0 86 65.1
PGR031G3691 Punica granatum HOM05D002115 ORTHO05D002263 1.8e-23 113.2 113 54.9
Sed0026904 Sechium edule HOM05D002115 ORTHO05D002263 1.8e-23 113.2 84 67.9
Psat7g134600 Pisum sativum HOM05D002115 ORTHO05D002263 3.2e-23 112.5 84 66.7
SGA_v2.0_scaffold4G02144 Striga asiatica HOM05D002115 ORTHO05D002263 9.2e-23 110.9 83 67.5
Glyma.05G143100 Glycine max HOM05D002115 ORTHO05D002263 1.2e-22 110.5 84 70.2
ATR1098G055 Amborella trichopoda HOM05D002115 ORTHO05D002263 2.0e-22 109.8 84 69.0
Eucgr.F03190 Eucalyptus grandis HOM05D002115 ORTHO05D002263 2.0e-22 109.8 83 66.3
MELO3C002767.2 Cucumis melo HOM05D002115 ORTHO05D002263 2.7e-22 109.4 84 65.5
CsaV3_1G036830 Cucumis sativus L. HOM05D002115 ORTHO05D002263 2.7e-22 109.4 84 65.5
Manes.15G124650 Manihot esculenta HOM05D002115 ORTHO05D002263 2.7e-22 109.4 84 65.5
Ca_18162_v3 Cicer arietinum L. HOM05D002115 ORTHO05D002263 3.5e-22 109.0 86 65.1
ClCG03G006530 Citrullus lanatus HOM05D002115 ORTHO05D002263 5.9e-22 108.2 83 66.3
Lsat_1_v5_gn_6_105541 Lactuca sativa HOM05D002115 ORTHO05D002263 1.0e-21 107.5 69 78.3
MD03G1137700 Malus domestica HOM05D002115 ORTHO05D002263 1.0e-21 107.5 89 62.9
arahy.Tifrunner.gnm1.ann1.2Y4SM6 Arachis hypogaea HOM05D002115 ORTHO05D002263 2.3e-21 106.3 86 66.3
MD10G1258600 Malus domestica HOM05D002115 ORTHO05D002263 2.3e-21 106.3 90 62.2
Prupe.4G085100 Prunus persica HOM05D002115 ORTHO05D002263 5.0e-21 105.1 90 61.1
Sed0015162 Sechium edule HOM05D002115 ORTHO05D002263 5.0e-21 105.1 83 65.1
Manes.17G074000 Manihot esculenta HOM05D002115 ORTHO05D002263 6.6e-21 104.8 84 66.7
arahy.Tifrunner.gnm1.ann1.949BMZ Arachis hypogaea HOM05D002115 ORTHO05D002263 8.6e-21 104.4 86 65.1
Lalb_Chr13g0294001 Lupinus albus HOM05D002115 ORTHO05D002263 1.5e-20 103.6 112 53.6
FAN16G0539 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.9e-20 103.2 90 61.1
FAN16G1035 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.9e-20 103.2 90 61.1
Atru.chr10.1123 Acer truncatum HOM05D002115 ORTHO05D002263 4.3e-20 102.1 84 61.9
FAN25G0016 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.2e-19 100.5 90 61.1
VMungo0251G1773 Vigna mungo HOM05D002115 ORTHO05D002263 1.2e-19 100.5 84 65.5
FAN21G3828 Fragaria x ananassa HOM05D002115 ORTHO05D002263 1.6e-19 100.1 90 60.0
RcHm_v2.0_Chr5g0014771 Rosa chinensis HOM05D002115 ORTHO05D002263 2.1e-19 99.8 90 60.0
FvH4_3g05100 Fragaria vesca HOM05D002115 ORTHO05D002263 3.6e-19 99.0 90 58.9
FAN11G3721 Fragaria x ananassa HOM05D002115 ORTHO05D002263 3.6e-19 99.0 90 58.9
Lj4g0017001 Lotus japonicus HOM05D002115 ORTHO05D002263 4.7e-19 98.6 85 63.5
SEGI_02208 Sequoiadendron giganteum HOM05D002115 ORTHO05D002263 1.8e-18 96.7 117 45.3
CDE01G0330 Ceratophyllum demersum HOM05D002115 ORTHO05D002263 3.1e-18 95.9 86 58.1
CDE12G0477 Ceratophyllum demersum HOM05D002115 ORTHO05D002263 6.8e-18 94.7 86 58.1
Sc07g0003090 Simmondsia chinensis HOM05D002115 ORTHO05D002263 1.2e-17 94.0 83 62.7
arahy.Tifrunner.gnm1.ann1.X0DSCJ Arachis hypogaea HOM05D002115 ORTHO05D002263 8.3e-16 87.8 71 66.2
SHI24853 Sapria himalayana HOM05D002115 ORTHO05D002263 1.9e-15 86.7 84 58.3
HPP92_017720 Vanilla planifolia HOM05D002115 ORTHO05D002263 3.2e-15 85.9 83 54.2
unitig_52.g17392 Utricularia gibba HOM05D002115 ORTHO05D002263 5.4e-15 85.1 83 55.4
Oeu012707.1 Olea europaea HOM05D002115 ORTHO05D002263 1.2e-14 84.0 83 55.4
Cpa.g.sc229.1 Carica papaya HOM05D002115 ORTHO05D002263 2.0e-14 83.2 83 49.4
BcaC05g25656 Brassica carinata HOM05D002115 ORTHO05D002263 3.5e-14 82.4 83 50.6
C05p15630 Brassica napus HOM05D002115 ORTHO05D002263 3.5e-14 82.4 83 50.6
BolC5t30270H Brassica oleracea HOM05D002115 ORTHO05D002263 3.5e-14 82.4 83 50.6
Zm00001eb300000 Zea mays HOM05D002115 ORTHO05D002263 3.5e-14 82.4 77 55.8
A06p13130 Brassica napus HOM05D002115 ORTHO05D002263 4.6e-14 82.0 83 50.6
BraA06t24471Z Brassica rapa HOM05D002115 ORTHO05D002263 4.6e-14 82.0 83 50.6
Oeu041852.1 Olea europaea HOM05D002115 ORTHO05D002263 4.6e-14 82.0 44 86.4
Sp1g15350 Schrenkiella parvula HOM05D002115 ORTHO05D002263 6.0e-14 81.6 83 50.6
BcaB07g34041 Brassica carinata HOM05D002115 ORTHO05D002263 7.8e-14 81.3 83 49.4
Os07g0150500 Oryza sativa ssp. japonica HOM05D002115 ORTHO05D002263 1.0e-13 80.9 72 58.3
Potri.011G081200 Populus trichocarpa HOM05D002115 ORTHO05D002263 1.0e-13 80.9 85 57.6
Sopen07g029380 Solanum pennellii HOM05D002115 ORTHO05D002263 1.3e-13 80.5 44 81.8
Aa31LG4G2610 Aethionema arabicum HOM05D002115 ORTHO05D002263 3.0e-13 79.3 83 50.6
Os03g0785300 Oryza sativa ssp. japonica HOM05D002115 ORTHO05D002263 3.0e-13 79.3 83 50.6
Thhalv10006705m.g Eutrema salsugineum HOM05D002115 ORTHO05D002263 5.0e-13 78.6 83 49.4
HPP92_014003 Vanilla planifolia HOM05D002115 ORTHO05D002263 8.6e-13 77.8 83 51.8
Sabra11G0064700 Salix brachista HOM05D002115 ORTHO05D002263 1.1e-12 77.4 85 54.1
THA.LOC104808073 Tarenaya hassleriana HOM05D002115 ORTHO05D002263 1.6e-11 73.6 82 47.6
A08p31040 Brassica napus HOM05D002115 ORTHO05D002263 2.1e-11 73.2 83 45.8
BraA08t35033Z Brassica rapa HOM05D002115 ORTHO05D002263 2.8e-11 72.8 83 48.2
THA.LOC104813972 Tarenaya hassleriana HOM05D002115 ORTHO05D002263 6.2e-11 71.6 83 47.0
Carub.0001s1696 Capsella rubella HOM05D002115 ORTHO05D002263 1.4e-10 70.5 83 45.8
AT1G17210 Arabidopsis thaliana HOM05D002115 ORTHO05D002263 2.3e-10 69.7 81 45.7
AL1G29450 Arabidopsis lyrata HOM05D002115 ORTHO05D002263 3.1e-10 69.3 81 45.7
CARHR017790 Cardamine hirsuta HOM05D002115 ORTHO05D002263 1.5e-09 67.0 80 45.0
Mapoly0044s0042 Marchantia polymorpha HOM05D002115 ORTHO05D002263 4.4e-09 65.5 84 47.6
Glyma.14G115000 Glycine max HOM05D002115 ORTHO05D014537 3.7e-08 62.4 50 72.0
SEGI_20870 Sequoiadendron giganteum HOM05D002115 ORTHO05D002263 9.2e-07 57.8 91 45.1
Zm00001eb059900 Zea mays HOM05D002115 ORTHO05D002263 9.2e-07 57.8 55 50.9
Oeu031805.1 Olea europaea HOM05D002115 ORTHO05D002263 2.1e-06 56.6 48 50.0
AagrBONN_evm.TU.Sc2ySwM_344.1038 Anthoceros agrestis HOM05D002115 ORTHO05D002263 2.7e-06 56.2 85 44.7
EL10Ac5g11237 Beta vulgaris HOM05D002115 ORTHO05D002263 3.5e-06 55.8 45 48.9
HPP92_024703 Vanilla planifolia HOM05D002115 ORTHO05D002263 3.5e-06 55.8 59 42.4
C08p17760 Brassica napus HOM05D002115 ORTHO05D002263 4.6e-06 55.5 80 42.5
BolC8t49402H Brassica oleracea HOM05D002115 ORTHO05D002263 4.6e-06 55.5 80 42.5
ATR0559G005 Amborella trichopoda HOM05D002115 ORTHO05D002263 6.0e-06 55.1 32 71.9
Potri.015G052400 Populus trichocarpa HOM05D002115 ORTHO05D002263 7.8e-06 54.7 84 35.7


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