Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0025600 Rhododendron simsii HOM05D000859 ORTHO05D000668 4.3e-104 381.3 193 100.0
Rhsim04G0026000 Rhododendron simsii HOM05D000859 ORTHO05D000668 1.2e-40 170.6 190 53.2
Rhsim04G0025700 Rhododendron simsii HOM05D000859 ORTHO05D000668 3.4e-40 169.1 191 53.4
Rhsim04G0025900 Rhododendron simsii HOM05D000859 ORTHO05D000668 1.7e-39 166.8 191 52.9
Medtr3g073990 Medicago truncatula HOM05D000859 ORTHO05D000668 5.1e-12 75.5 148 29.1
Psat5g136720 Pisum sativum HOM05D000859 ORTHO05D000668 7.3e-11 71.6 145 29.0
vmacro11931 Vaccinium macrocarpon HOM05D000298 ORTHO05D001098 9.5e-11 71.2 176 33.0
Rhsim04G0025300 Rhododendron simsii HOM05D000859 ORTHO05D000668 1.6e-10 70.5 174 33.3
arahy.Tifrunner.gnm1.ann1.QA5KMM Arachis hypogaea HOM05D000859 ORTHO05D000668 2.1e-10 70.1 147 30.6
Glyma.06G105700 Glycine max HOM05D000859 ORTHO05D000668 3.6e-10 69.3 150 27.3
Glyma.04G104600 Glycine max HOM05D000859 ORTHO05D000668 4.7e-10 68.9 150 27.3
VMungo1309G0282 Vigna mungo HOM05D000859 ORTHO05D000668 6.2e-10 68.6 150 27.3
arahy.Tifrunner.gnm1.ann1.7WZ7JX Arachis hypogaea HOM05D000859 ORTHO05D000668 8.1e-10 68.2 147 31.3
CSS0039098 Camellia sinensis var. sinensis HOM05D000859 ORTHO05D000668 5.2e-09 65.5 176 30.7
CSS0036116 Camellia sinensis var. sinensis HOM05D000859 ORTHO05D000668 2.0e-08 63.5 136 28.7
Manes.02G155000 Manihot esculenta HOM05D000859 ORTHO05D000668 3.4e-08 62.8 129 29.5
Oeu021678.1 Olea europaea HOM05D000859 ORTHO05D000668 3.4e-08 62.8 144 28.5
unitig_747.g21823 Utricularia gibba HOM05D000875 ORTHO05D000684 3.4e-08 62.8 125 30.4
Ca_15231_v3 Cicer arietinum L. HOM05D000859 ORTHO05D000668 4.4e-08 62.4 189 24.9
Lalb_Chr23g0270671 Lupinus albus HOM05D000859 ORTHO05D000668 4.4e-08 62.4 134 28.4
BcaB04g18485 Brassica carinata HOM05D000859 ORTHO05D000668 9.9e-08 61.2 149 26.8
Oeu021674.1 Olea europaea HOM05D000859 ORTHO05D000668 9.9e-08 61.2 143 28.0
Oeu021680.1 Olea europaea HOM05D000859 ORTHO05D000668 9.9e-08 61.2 138 28.3
Psat1g198160 Pisum sativum HOM05D000859 ORTHO05D000668 9.9e-08 61.2 154 25.3
arahy.Tifrunner.gnm1.ann1.6DJV34 Arachis hypogaea HOM05D000859 ORTHO05D000668 1.3e-07 60.8 108 30.6
Manes.18G069700 Manihot esculenta HOM05D000859 ORTHO05D000668 1.3e-07 60.8 127 26.8
Sed0019538 Sechium edule HOM05D000859 ORTHO05D000668 1.3e-07 60.8 132 31.8
arahy.Tifrunner.gnm1.ann1.VYCB27 Arachis hypogaea HOM05D000859 ORTHO05D000668 1.7e-07 60.5 108 30.6
Oeu021683.1 Olea europaea HOM05D000859 ORTHO05D000668 1.7e-07 60.5 138 27.5
Migut.H02381 Erythranthe guttata HOM05D000859 ORTHO05D000668 2.2e-07 60.1 133 30.1
Cc05_g11220 Coffea canephora HOM05D000859 ORTHO05D000668 2.9e-07 59.7 188 28.2
Oeu021676.1 Olea europaea HOM05D000859 ORTHO05D000668 2.9e-07 59.7 138 26.1
Rhsim06G0207100 Rhododendron simsii HOM05D000859 ORTHO05D000668 2.9e-07 59.7 189 29.1
Thhalv10026398m.g Eutrema salsugineum HOM05D000859 ORTHO05D000668 3.7e-07 59.3 148 27.0
Medtr2g016020 Medicago truncatula HOM05D000859 ORTHO05D000668 4.9e-07 58.9 157 26.8
Thhalv10001051m.g Eutrema salsugineum HOM05D000859 ORTHO05D000668 6.4e-07 58.5 137 27.7
ClCG01G005440 Citrullus lanatus HOM05D000859 ORTHO05D000668 8.4e-07 58.2 138 27.5
Sc05g0007110 Simmondsia chinensis HOM05D000859 ORTHO05D000668 1.1e-06 57.8 186 25.3
BcaC01g00551 Brassica carinata HOM05D000859 ORTHO05D000668 1.4e-06 57.4 96 32.3
A08p13890 Brassica napus HOM05D000859 ORTHO05D000668 1.4e-06 57.4 96 32.3
C03p81380 Brassica napus HOM05D000859 ORTHO05D000668 1.4e-06 57.4 96 32.3
BolC3t20401H Brassica oleracea HOM05D000859 ORTHO05D000668 1.4e-06 57.4 96 32.3
BraA08t33374Z Brassica rapa HOM05D000859 ORTHO05D000668 1.4e-06 57.4 96 32.3
Gohir.D01G042768 Gossypium hirsutum HOM05D000859 ORTHO05D000668 1.4e-06 57.4 93 34.4
Sp1g25070 Schrenkiella parvula HOM05D000859 ORTHO05D000668 1.4e-06 57.4 139 29.5
Sp7g15430 Schrenkiella parvula HOM05D000859 ORTHO05D000668 1.4e-06 57.4 149 28.9
MSTRG.2556 Avicennia marina HOM05D000859 ORTHO05D000668 1.9e-06 57.0 133 26.3
BcaNung06736 Brassica carinata HOM05D000859 ORTHO05D000668 1.9e-06 57.0 96 33.3
Nn1g09106 Nelumbo nucifera HOM05D000859 ORTHO05D000668 1.9e-06 57.0 103 30.1
A01p10610 Brassica napus HOM05D000859 ORTHO05D000668 2.4e-06 56.6 96 32.3
BraA01t01008Z Brassica rapa HOM05D000859 ORTHO05D000668 2.4e-06 56.6 96 32.3
Lj6g0028130 Lotus japonicus HOM05D000859 ORTHO05D000668 2.4e-06 56.6 183 25.1
Sp2g10800 Schrenkiella parvula HOM05D000859 ORTHO05D000668 2.4e-06 56.6 137 27.7
TWI56G0155 Tripterygium wilfordii HOM05D000859 ORTHO05D000668 2.4e-06 56.6 127 29.1
BcaC09g51484 Brassica carinata HOM05D000859 ORTHO05D000668 3.2e-06 56.2 96 32.3
C01p12550 Brassica napus HOM05D000859 ORTHO05D000668 3.2e-06 56.2 96 32.3
BolC1t01229H Brassica oleracea HOM05D000859 ORTHO05D000668 3.2e-06 56.2 96 32.3
Ca_00434_v3 Cicer arietinum L. HOM05D000859 ORTHO05D000668 3.2e-06 56.2 128 28.1
Lalb_Chr18g0054501 Lupinus albus HOM05D000859 ORTHO05D000668 3.2e-06 56.2 139 30.2
AL8G12680 Arabidopsis lyrata HOM05D000859 ORTHO05D000668 4.1e-06 55.8 137 27.0
AT5G45880 Arabidopsis thaliana HOM05D000859 ORTHO05D000668 4.1e-06 55.8 137 26.3
BcaC03g16796 Brassica carinata HOM05D000859 ORTHO05D000668 4.1e-06 55.8 139 28.8
BolC2t10721H Brassica oleracea HOM05D000859 ORTHO05D000668 4.1e-06 55.8 139 28.8
Medtr3g087540 Medicago truncatula HOM05D000859 ORTHO05D000668 4.1e-06 55.8 106 29.2
THA.LOC104813125 Tarenaya hassleriana HOM05D000859 ORTHO05D000668 4.1e-06 55.8 129 27.9
C07p49850 Brassica napus HOM05D000859 ORTHO05D000668 5.4e-06 55.5 136 27.9
BolC7t45487H Brassica oleracea HOM05D000859 ORTHO05D000668 5.4e-06 55.5 136 27.9
BcaB07g30426 Brassica carinata HOM05D000859 ORTHO05D000668 7.1e-06 55.1 136 27.2
A02p29420 Brassica napus HOM05D000859 ORTHO05D000668 7.1e-06 55.1 136 27.2
A03p51430 Brassica napus HOM05D000859 ORTHO05D000668 7.1e-06 55.1 136 27.9
C02p46690 Brassica napus HOM05D000859 ORTHO05D000668 7.1e-06 55.1 136 27.2
BraA02t07969Z Brassica rapa HOM05D000859 ORTHO05D000668 7.1e-06 55.1 136 27.2
BraA03t14227Z Brassica rapa HOM05D000859 ORTHO05D000668 7.1e-06 55.1 136 27.9
AL7G35670 Arabidopsis lyrata HOM05D000859 ORTHO05D000668 9.2e-06 54.7 85 34.1
AT4G18596 Arabidopsis thaliana HOM05D000859 ORTHO05D000668 9.2e-06 54.7 85 34.1
BcaC05g26930 Brassica carinata HOM05D000859 ORTHO05D000668 9.2e-06 54.7 139 28.1
BcaC06g34388 Brassica carinata HOM05D000859 ORTHO05D000668 9.2e-06 54.7 136 27.2
A09p37190 Brassica napus HOM05D000859 ORTHO05D000668 9.2e-06 54.7 139 28.1
C05p27830 Brassica napus HOM05D000859 ORTHO05D000668 9.2e-06 54.7 139 28.1
C07p29180 Brassica napus HOM05D000859 ORTHO05D000668 9.2e-06 54.7 136 27.2
BolC5t31504H Brassica oleracea HOM05D000859 ORTHO05D000668 9.2e-06 54.7 139 28.1
BolC7t43461H Brassica oleracea HOM05D000859 ORTHO05D000668 9.2e-06 54.7 136 27.2
BraA09t39235Z Brassica rapa HOM05D000859 ORTHO05D000668 9.2e-06 54.7 139 28.1
Lj4g0008965 Lotus japonicus HOM05D000859 ORTHO05D000668 9.2e-06 54.7 130 26.2
Potri.011G111300 Populus trichocarpa HOM05D000859 ORTHO05D000668 9.2e-06 54.7 135 29.6


User provided reference genes

Program Settings