Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 5.5e-278 960.3 476 100.0
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 4.7e-237 824.3 527 81.4
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 4.6e-224 781.2 471 81.7
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 4.8e-221 771.2 481 79.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 6.4e-218 760.8 475 81.3
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 1.9e-217 759.2 491 78.8
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 7.1e-217 757.3 480 79.0
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 9.3e-217 756.9 475 79.8
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 6.0e-216 754.2 478 78.9
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 5.1e-215 751.1 478 78.5
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 2.4e-212 742.3 478 78.9
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 4.0e-212 741.5 476 77.7
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 1.3e-210 736.5 476 77.5
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 1.7e-210 736.1 540 71.7
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 2.2e-210 735.7 478 78.0
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 6.5e-210 734.2 497 75.3
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 1.1e-209 733.4 448 80.4
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 1.1e-209 733.4 482 76.8
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.9e-209 732.6 476 76.9
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 3.2e-209 731.9 476 77.1
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 5.5e-209 731.1 497 75.1
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 5.5e-209 731.1 474 77.8
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 7.1e-209 730.7 468 77.6
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 6.0e-208 727.6 473 76.5
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 7.9e-208 727.2 476 76.7
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 1.0e-207 726.9 451 78.5
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 1.3e-207 726.5 484 74.8
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 1.8e-207 726.1 451 78.7
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 1.8e-207 726.1 476 77.3
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 1.8e-207 726.1 445 81.3
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 5.1e-207 724.5 480 75.8
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 8.7e-207 723.8 479 76.6
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 1.1e-206 723.4 476 76.3
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 1.5e-206 723.0 456 79.6
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 1.9e-206 722.6 476 76.5
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 3.3e-206 721.8 485 74.4
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 5.7e-206 721.1 492 74.6
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 1.3e-205 719.9 466 77.7
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 1.3e-205 719.9 448 80.4
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 1.6e-205 719.5 476 76.7
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 4.8e-205 718.0 476 76.3
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 3.1e-204 715.3 436 81.0
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 4.1e-204 714.9 445 79.8
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 1.0e-202 710.3 501 72.7
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 2.2e-202 709.1 476 75.8
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 2.9e-202 708.8 458 76.9
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 6.5e-202 707.6 475 76.8
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 2.5e-201 705.7 428 82.0
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 9.3e-201 703.7 449 77.3
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 2.1e-200 702.6 451 77.2
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 1.0e-199 700.3 472 75.2
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 1.9e-198 696.0 502 72.9
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 1.2e-195 686.8 456 75.0
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 2.6e-195 685.6 479 72.7
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.0e-191 673.7 462 76.2
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 1.0e-191 673.7 476 72.3
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 1.4e-191 673.3 484 71.9
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 8.8e-191 670.6 519 67.6
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 2.5e-190 669.1 467 74.1
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 5.9e-187 657.9 457 73.7
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 8.5e-186 654.1 391 83.1
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 2.1e-184 649.4 471 70.3
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 4.7e-184 648.3 457 70.2
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 7.9e-184 647.5 434 74.0
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 1.8e-180 636.3 473 69.3
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 1.7e-178 629.8 494 67.0
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 2.9e-178 629.0 473 70.6
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 4.4e-174 615.1 433 69.3
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 1.4e-172 610.1 430 68.8
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 2.4e-172 609.4 471 68.2
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 3.7e-165 585.5 442 70.1
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 3.1e-164 582.4 492 60.6
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 4.1e-164 582.0 432 67.1
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 1.5e-158 563.5 383 76.5
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 7.0e-156 554.7 385 74.0
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 1.2e-155 553.9 431 62.4
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 4.4e-150 535.4 385 69.9
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 1.7e-130 470.3 436 55.5
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 2.5e-121 439.9 415 55.9
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 7.1e-108 395.2 251 77.7
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 4.6e-99 365.9 266 71.1
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.5e-86 324.3 236 71.6
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 1.5e-70 271.2 206 67.5
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 4.5e-70 269.6 206 67.0
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 4.5e-70 269.6 206 67.0
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 4.5e-70 269.6 206 67.0
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 9.4e-68 261.9 142 88.0
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 1.7e-61 241.1 146 79.5
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 1.9e-52 211.1 284 44.4
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 8.8e-50 202.2 153 67.3
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 4.9e-40 169.9 134 70.1
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 7.1e-15 86.3 93 52.7
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 6.6e-13 79.7 44 88.6
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 8.9e-10 69.3 46 73.9
Nn1g06725 Nelumbo nucifera HOM05D000461 ORTHO05D009768 6.0e-06 56.6 43 62.8


User provided reference genes

Program Settings