Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 3.0e-111 405.2 211 100.0
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 2.9e-45 186.0 227 53.3
Rhsim04G0017700 Rhododendron simsii HOM05D008666 ORTHO05D009871 3.3e-33 146.0 193 51.8
Rhsim04G0017600 Rhododendron simsii HOM05D008666 ORTHO05D009871 3.7e-32 142.5 159 54.1
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 4.8e-32 142.1 215 41.9
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.0e-18 97.8 216 35.2
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 1.7e-16 90.5 215 34.4
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 2.2e-16 90.1 218 31.7
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 2.0e-14 83.6 217 32.3
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 3.5e-14 82.8 213 31.5
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 1.0e-13 81.3 210 30.0
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.0e-13 81.3 221 30.8
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 3.8e-13 79.3 212 32.5
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 3.8e-13 79.3 221 31.7
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 6.5e-13 78.6 209 30.1
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 1.5e-12 77.4 213 33.3
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 2.5e-12 76.6 223 29.1
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.2e-11 74.3 217 28.6
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 1.8e-10 70.5 140 32.9
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 1.8e-10 70.5 200 28.5
CSS0038280 Camellia sinensis var. sinensis HOM05D010293 ORTHO05D009871 6.8e-10 68.6 122 37.7
EL10Ac5g12049 Beta vulgaris HOM05D014664 ORTHO05D009871 1.2e-09 67.8 216 28.7
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 1.5e-09 67.4 214 29.4
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.5e-09 67.4 223 29.1
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 9.8e-09 64.7 229 28.8
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 2.8e-08 63.2 215 28.8
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 3.7e-08 62.8 144 32.6
Ah.10g037450 Amaranthus hybridus HOM05D014664 ORTHO05D009871 1.1e-07 61.2 214 25.2
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 1.1e-07 61.2 136 39.0
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 1.4e-07 60.8 207 26.6
AUR62043278 Chenopodium quinoa HOM05D014664 ORTHO05D009871 1.8e-07 60.5 207 26.1
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 3.1e-07 59.7 239 26.8
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 9.1e-07 58.2 221 27.6


User provided reference genes

Program Settings