Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 8.9e-285 983.0 534 100.0
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 6.3e-230 800.8 536 83.0
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 4.7e-201 704.9 534 73.6
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 2.5e-178 629.4 543 67.4
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.7e-155 551.6 546 59.2
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 8.2e-145 518.1 538 57.2
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.1e-144 517.7 534 60.7
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 1.1e-141 507.7 464 63.6
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 1.2e-140 504.2 543 57.5
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 5.9e-135 485.3 547 53.0
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 3.8e-134 482.6 547 53.4
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 1.0e-126 458.0 547 51.7
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 5.5e-125 452.2 537 53.1
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 1.4e-123 447.6 537 52.9
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.8e-123 447.2 537 51.8
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 6.7e-123 445.3 533 52.0
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 8.8e-123 444.9 543 52.1
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 4.4e-122 442.6 531 51.4
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.1e-117 427.9 535 50.5
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 9.4e-117 424.9 536 50.0
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 4.7e-116 422.5 536 48.9
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.0e-115 421.4 536 49.1
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.0e-115 421.4 541 50.1
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 2.3e-115 420.2 538 50.9
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 2.6e-114 416.8 534 51.1
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 3.3e-114 416.4 541 49.2
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 4.4e-114 416.0 541 49.9
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 6.3e-113 412.1 533 47.3
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 2.6e-111 406.8 515 50.9
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.2e-110 403.7 518 49.2
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 3.2e-109 399.8 538 47.4
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.6e-108 397.5 547 48.1
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.0e-107 394.8 540 46.7
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 1.4e-107 394.4 545 48.6
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.0e-106 390.6 537 47.7
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 2.6e-106 390.2 464 52.2
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 3.3e-106 389.8 540 45.7
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 7.5e-106 388.7 540 46.3
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 3.7e-105 386.3 535 47.5
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 4.8e-105 386.0 548 46.7
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.8e-104 384.0 535 48.0
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 3.1e-104 383.3 455 51.6
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 4.1e-104 382.9 542 47.2
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 9.1e-104 381.7 536 47.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 2.0e-103 380.6 546 46.0
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 3.5e-103 379.8 547 45.2
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 4.5e-103 379.4 542 46.7
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 5.9e-103 379.0 535 48.2
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 7.7e-103 378.6 535 48.2
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.2e-100 371.3 538 45.5
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 4.7e-100 369.4 450 51.3
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 6.1e-100 369.0 530 45.5
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 8.0e-100 368.6 535 47.7
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 3.0e-99 366.7 535 44.5
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 3.1e-96 356.7 534 45.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 4.1e-96 356.3 561 43.7
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 5.5e-93 345.9 453 49.0
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 6.1e-92 342.4 530 43.0
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 4.4e-90 336.3 528 41.7
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 5.4e-88 329.3 532 41.9
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 2.7e-87 327.0 541 42.0
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 3.5e-87 326.6 530 40.6
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 1.0e-86 325.1 527 41.7
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 7.3e-85 318.9 535 41.7
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 4.4e-82 309.7 536 38.8
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.7e-81 306.6 477 43.4
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.9e-80 304.3 599 35.6
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 3.9e-78 296.6 360 50.0
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 3.3e-77 293.5 448 43.1
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 1.2e-76 291.6 535 39.1
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.6e-76 290.0 478 41.0
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 1.4e-75 288.1 536 40.7
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 1.4e-75 288.1 536 40.7
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 5.2e-75 286.2 256 64.5
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 1.2e-71 275.0 526 39.9
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 1.9e-69 267.7 307 53.1
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 2.5e-69 267.3 371 46.1
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 3.3e-69 266.9 372 45.7
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 8.1e-68 262.3 275 56.7
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.1e-67 261.9 366 45.9
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 4.0e-67 260.0 299 48.5
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 1.2e-66 258.5 359 45.7
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 1.5e-66 258.1 264 55.7
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 3.4e-66 256.9 329 48.6
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 1.3e-65 255.0 455 42.9
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 6.4e-65 252.7 247 57.9
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 1.2e-63 248.4 444 40.3
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 1.0e-62 245.4 442 40.0
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.2e-60 238.4 444 39.6
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 3.8e-57 226.9 458 39.1
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 4.6e-55 219.9 147 78.2
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.7e-54 218.0 607 29.7
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 1.3e-52 211.8 592 29.6
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.4e-51 207.6 321 44.5
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 8.7e-46 189.1 361 38.0
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 9.6e-45 185.7 361 37.4
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 2.1e-39 167.9 241 41.1
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 1.3e-25 122.1 389 30.8
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.9e-25 120.9 110 58.2
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 3.3e-21 107.5 87 62.1
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.2e-18 99.0 83 60.2
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.7e-17 95.1 86 51.2
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 8.8e-14 82.8 165 41.2
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.7e-12 78.6 66 57.6
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.0e-09 69.3 59 61.0
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 6.5e-09 66.6 71 59.2
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 1.8e-06 58.5 259 30.9


User provided reference genes

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