Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 4.3e-225 784.6 492 100.0
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 3.2e-119 433.0 533 65.5
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.0e-97 360.5 497 45.5
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.0e-96 358.2 497 45.5
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 9.3e-95 351.7 491 45.0
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 5.9e-81 305.8 493 48.9
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 2.3e-69 267.3 241 59.8
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 9.7e-68 261.9 497 38.0
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.3e-67 261.5 217 63.6
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.7e-67 261.2 238 58.0
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.1e-66 258.5 245 56.3
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 2.4e-66 257.3 244 58.6
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.2e-65 255.0 212 62.7
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 4.5e-65 253.1 245 59.2
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 1.3e-64 251.5 246 58.9
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.3e-64 251.5 244 58.6
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 3.2e-63 246.9 196 67.3
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 4.2e-63 246.5 243 56.8
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 5.5e-63 246.1 239 57.3
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.2e-62 245.0 212 62.3
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.1e-62 244.2 242 57.0
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 2.1e-62 244.2 245 55.9
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.7e-62 243.8 177 70.1
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 3.6e-62 243.4 238 57.1
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 8.0e-62 242.3 242 56.6
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.8e-61 241.1 242 56.2
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.2e-61 239.6 242 55.8
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.5e-60 238.0 244 55.7
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.5e-60 238.0 239 55.2
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.5e-60 238.0 242 52.1
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.6e-60 237.3 234 53.0
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 3.3e-60 236.9 220 56.8
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 4.4e-60 236.5 239 54.8
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.8e-59 233.8 207 57.5
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.1e-58 231.9 192 62.0
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.4e-58 231.5 227 56.8
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 4.1e-58 229.9 195 63.6
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.2e-57 228.4 224 54.0
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.2e-57 228.4 241 53.9
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.6e-57 228.0 247 53.4
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 2.0e-57 227.6 222 56.3
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 4.5e-57 226.5 177 62.7
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 5.9e-57 226.1 224 54.5
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 7.7e-57 225.7 220 55.9
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 1.0e-56 225.3 213 56.3
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 2.2e-56 224.2 214 55.6
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 3.8e-56 223.4 222 56.3
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 6.5e-56 222.6 201 58.2
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.5e-55 221.5 232 51.3
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 4.2e-55 219.9 228 53.9
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 7.2e-55 219.2 234 53.4
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 9.4e-55 218.8 232 50.0
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 1.6e-54 218.0 252 49.2
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 2.1e-54 217.6 221 55.7
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 2.1e-54 217.6 215 56.3
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 2.1e-54 217.6 223 52.5
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 3.6e-54 216.9 224 54.5
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 3.6e-54 216.9 227 55.9
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 6.1e-54 216.1 177 59.3
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.4e-53 214.9 178 61.2
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.4e-53 214.9 212 55.2
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 2.3e-53 214.2 169 61.5
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 3.0e-53 213.8 169 60.4
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 4.0e-53 213.4 214 50.9
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 5.2e-53 213.0 175 58.9
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 8.8e-53 212.2 201 53.7
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 8.8e-53 212.2 177 59.3
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 8.8e-53 212.2 215 53.5
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.2e-52 211.8 178 60.7
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.0e-52 211.1 169 60.4
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 2.0e-52 211.1 224 48.7
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.6e-52 210.7 214 50.5
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 2.6e-52 210.7 196 53.6
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 3.4e-52 210.3 214 50.0
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 4.4e-52 209.9 168 60.7
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 5.7e-52 209.5 175 61.1
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 9.8e-52 208.8 206 53.9
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 9.8e-52 208.8 230 47.8
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 1.7e-51 208.0 195 52.3
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 1.7e-51 208.0 174 62.1
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 2.8e-51 207.2 227 51.1
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 4.8e-51 206.5 211 53.6
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 6.3e-51 206.1 167 61.7
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 6.3e-51 206.1 167 58.1
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 1.4e-50 204.9 246 49.6
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.8e-50 204.5 260 48.5
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 9.1e-50 202.2 245 47.3
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.0e-48 198.7 206 51.5
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.7e-48 198.0 212 51.4
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 2.2e-48 197.6 154 63.6
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 2.2e-48 197.6 214 49.5
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 5.0e-48 196.4 312 40.1
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.1e-47 195.3 212 50.9
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 1.5e-47 194.9 187 52.4
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 1.4e-45 188.3 194 52.1
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 6.8e-45 186.0 194 51.5
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 1.6e-41 174.9 119 68.1
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 6.6e-40 169.5 164 56.1
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 4.7e-30 136.7 124 50.8
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 4.0e-29 133.7 176 40.3
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.3e-27 128.6 150 53.3
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 4.9e-27 126.7 129 44.2
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.7e-24 118.2 196 34.7
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 3.0e-24 117.5 117 52.1
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 1.5e-23 115.2 180 33.9
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 3.6e-22 110.5 377 28.9
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 5.2e-21 106.7 90 57.8
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.6e-14 85.1 70 52.9
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 4.9e-11 73.6 182 28.0


User provided reference genes

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