Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.7e-213 745.7 367 100.0
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 2.4e-180 635.6 362 86.7
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.8e-160 568.9 370 78.1
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.1e-151 540.4 373 74.3
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 3.1e-143 512.3 338 72.8
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 8.9e-143 510.8 339 74.0
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.5e-142 510.0 337 72.7
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.6e-142 509.2 344 71.2
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.1e-140 503.8 344 70.1
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 3.2e-140 502.3 349 70.5
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 5.4e-140 501.5 356 68.8
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.6e-139 498.4 349 69.9
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 8.7e-138 494.2 348 68.4
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.1e-137 493.8 348 68.7
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 9.6e-137 490.7 353 67.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.3e-136 490.3 355 68.7
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 2.1e-136 489.6 349 68.8
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 2.8e-136 489.2 360 67.2
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.4e-135 486.9 342 68.4
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 5.3e-135 485.0 352 67.9
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.0e-134 483.0 340 70.0
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.6e-134 482.6 365 66.0
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 1.7e-133 479.9 362 65.5
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.1e-132 477.2 364 66.2
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.9e-132 476.5 333 69.1
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 2.4e-132 476.1 332 69.0
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 5.4e-132 474.9 348 67.0
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 6.0e-131 471.5 351 66.4
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.3e-130 469.5 322 68.6
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.0e-130 469.2 358 63.4
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 3.9e-130 468.8 358 65.6
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.1e-129 467.2 343 67.6
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 1.5e-129 466.8 356 63.5
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 3.3e-129 465.7 326 71.5
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 2.8e-128 462.6 344 66.0
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 3.7e-128 462.2 331 69.2
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 4.8e-128 461.8 360 63.1
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 4.8e-128 461.8 352 64.8
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 1.4e-127 460.3 343 65.0
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 4.0e-127 458.8 352 64.5
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 2.0e-126 456.4 344 65.1
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 4.5e-126 455.3 325 67.4
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 4.5e-126 455.3 362 63.5
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.9e-124 449.9 312 68.6
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 3.2e-124 449.1 366 62.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 3.2e-124 449.1 352 64.8
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 4.2e-124 448.7 353 64.0
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 4.2e-124 448.7 339 65.5
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.6e-123 446.8 328 67.1
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.6e-123 445.3 353 64.0
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 1.0e-122 444.1 349 62.2
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.3e-122 443.7 342 65.2
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.3e-122 443.7 357 63.0
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.3e-122 443.0 348 62.4
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 3.9e-122 442.2 338 64.8
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 3.9e-122 442.2 353 62.3
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 3.9e-122 442.2 331 63.7
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 5.1e-122 441.8 352 61.6
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 5.1e-122 441.8 342 64.6
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 1.1e-121 440.7 349 64.5
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.1e-121 440.7 338 63.6
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.5e-121 440.3 333 64.3
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 1.3e-120 437.2 332 64.2
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 2.4e-119 433.0 305 67.2
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 6.9e-119 431.4 367 59.7
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 2.0e-118 429.9 370 63.2
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 2.0e-118 429.9 290 70.7
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 4.5e-118 428.7 347 62.0
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 7.6e-118 427.9 368 59.5
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 2.2e-117 426.4 365 58.9
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.9e-117 426.0 367 59.4
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 2.9e-117 426.0 372 57.5
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 2.9e-117 426.0 359 61.0
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 8.4e-117 424.5 368 57.1
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.1e-116 424.1 363 58.4
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 1.9e-116 423.3 370 58.9
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 2.5e-116 422.9 378 57.7
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 9.3e-116 421.0 360 60.0
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 9.3e-116 421.0 366 58.5
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.1e-113 414.1 359 59.1
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 1.1e-113 414.1 356 59.6
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 3.3e-113 412.5 366 57.4
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 5.7e-113 411.8 353 59.5
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.3e-112 410.6 295 65.4
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.4e-111 407.1 357 57.7
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.4e-111 407.1 325 63.1
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 4.1e-111 405.6 349 57.9
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 1.3e-109 400.6 370 56.5
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.2e-109 399.8 327 61.5
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 9.3e-108 394.4 252 74.6
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 2.1e-107 393.3 283 66.1
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.3e-105 386.0 341 58.9
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.8e-104 382.9 367 56.1
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.8e-95 353.6 334 56.6
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.5e-94 350.5 260 65.8
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.9e-92 343.6 255 62.0
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 5.2e-90 335.5 309 52.1
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.8e-87 327.0 321 52.0
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 6.5e-85 318.5 227 73.1
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 3.6e-83 312.8 265 60.4
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 1.5e-81 307.4 228 67.5
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.8e-80 302.4 309 54.0
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 3.1e-79 299.7 325 47.7
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 7.0e-79 298.5 247 59.9
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.7e-77 293.9 237 62.0
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.2e-77 293.5 308 53.9
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.5e-76 290.0 309 53.7
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 6.8e-74 282.0 327 46.8
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 3.1e-71 273.1 443 37.0
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 3.1e-71 273.1 252 52.4
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 2.0e-70 270.4 231 61.0
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.2e-59 234.6 216 50.9
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 8.0e-59 231.9 345 40.6
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 4.6e-54 216.1 156 64.7
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 8.9e-50 201.8 154 64.9
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 7.0e-47 192.2 129 71.3
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 4.3e-44 183.0 392 32.9
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 5.6e-44 182.6 124 66.9
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 2.8e-43 180.3 172 57.0
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 1.2e-41 174.9 410 32.0
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 1.4e-39 167.9 108 75.9
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 6.0e-38 162.5 349 33.0
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 2.3e-37 160.6 125 58.4
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 5.2e-34 149.4 128 55.5
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 8.1e-27 125.6 172 48.3
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.4e-26 124.0 85 67.1
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 9.9e-25 118.6 95 55.8
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 7.3e-20 102.4 63 76.2
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.3e-19 101.7 65 70.8
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 1.1e-12 78.6 56 73.2
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 7.4e-12 75.9 119 41.2
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 6.9e-10 69.3 180 31.1
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 7.9e-06 55.8 175 28.6
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 7.9e-06 55.8 175 28.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 7.9e-06 55.8 175 28.6


User provided reference genes

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