Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0263400 Rhododendron simsii HOM05D008750 ORTHO05D010839 5.9e-147 524.2 276 100.0
CSS0033938 Camellia sinensis var. sinensis HOM05D008750 ORTHO05D010839 7.0e-23 112.1 118 49.2
Dinv42750 Davidia involucrata HOM05D008750 ORTHO05D010839 1.6e-22 110.9 86 62.8
Dinv43352 Davidia involucrata HOM05D008750 ORTHO05D010839 1.6e-22 110.9 86 62.8
Rhsim03G0263300 Rhododendron simsii HOM05D008750 ORTHO05D010839 1.8e-18 97.4 116 46.6
Rhsim01G0007300 Rhododendron simsii HOM05D008750 ORTHO05D010839 1.2e-17 94.7 88 54.5
Lj7C470T7 Lonicera japonica HOM05D008750 ORTHO05D010839 1.2e-14 84.7 76 60.5
Lj2C67T7 Lonicera japonica HOM05D008750 ORTHO05D010839 2.2e-13 80.5 74 51.4
Lj7C470T6 Lonicera japonica HOM05D008750 ORTHO05D010839 2.2e-13 80.5 74 54.1
Manes.06G024500 Manihot esculenta HOM05D008750 ORTHO05D010839 2.5e-12 77.0 80 48.8
Manes.06G024650 Manihot esculenta HOM05D008750 ORTHO05D010839 2.5e-12 77.0 82 45.1
Thecc.09G167900 Theobroma cacao HOM05D008750 ORTHO05D010839 2.5e-12 77.0 82 48.8
COL.COLO4_38410 Corchorus olitorius HOM05D008750 ORTHO05D010839 9.4e-12 75.1 95 46.3
Eucgr.C02392 Eucalyptus grandis HOM05D008750 ORTHO05D010839 9.4e-12 75.1 75 44.0
DCAR_017964 Daucus carota HOM05D008750 ORTHO05D010839 2.1e-11 73.9 88 44.3
DCAR_017962 Daucus carota HOM05D008750 ORTHO05D010839 6.1e-11 72.4 88 44.3
Lj1C678T11 Lonicera japonica HOM05D000487 ORTHO05D000405 8.0e-11 72.0 63 52.4
Duzib168G0353 Durio zibethinus HOM05D008750 ORTHO05D010839 1.0e-10 71.6 82 43.9
DCAR_017963 Daucus carota HOM05D008750 ORTHO05D010839 3.0e-10 70.1 80 45.0
ECA236G4119 Erigeron canadensis HOM05D008750 ORTHO05D010839 4.0e-10 69.7 113 41.6
ECA236G3374 Erigeron canadensis HOM05D008750 ORTHO05D010839 3.4e-09 66.6 118 37.3
MELO3C004079.2 Cucumis melo HOM05D008750 ORTHO05D010839 4.4e-09 66.2 92 38.0
AUR62016235 Chenopodium quinoa HOM05D008750 ORTHO05D010839 1.3e-08 64.7 94 42.6
DCAR_017961 Daucus carota HOM05D008750 ORTHO05D010839 1.7e-08 64.3 80 41.2
DCAR_017960 Daucus carota HOM05D008750 ORTHO05D010839 2.8e-08 63.5 80 43.8
AUR62041658 Chenopodium quinoa HOM05D008750 ORTHO05D010839 6.3e-08 62.4 83 43.4
EL10Ac3g05536 Beta vulgaris HOM05D008750 ORTHO05D010839 1.4e-07 61.2 96 40.6
CsaV3_2G008040 Cucumis sativus L. HOM05D008750 ORTHO05D010839 2.4e-07 60.5 73 41.1
Lsat_1_v5_gn_8_66061 Lactuca sativa HOM05D008750 ORTHO05D010839 7.0e-07 58.9 86 41.9
Nn4g24057 Nelumbo nucifera HOM05D041019 ORTHO05D010839 9.1e-07 58.5 87 42.5
Lsat_1_v5_gn_8_66041 Lactuca sativa HOM05D008750 ORTHO05D010839 1.6e-06 57.8 94 39.4
ECA236G4277 Erigeron canadensis HOM05D008750 ORTHO05D010839 2.0e-06 57.4 86 39.5
Sed0019741 Sechium edule HOM05D008750 ORTHO05D010839 2.0e-06 57.4 76 39.5
Sed0004116 Sechium edule HOM05D008750 ORTHO05D010839 4.5e-06 56.2 87 35.6


User provided reference genes

Program Settings