Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 5.1e-221 770.8 388 100.0
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 6.7e-173 610.9 403 79.4
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.6e-164 582.4 400 74.8
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.7e-163 579.7 392 74.7
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.8e-154 549.7 382 73.3
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.9e-143 513.1 371 69.3
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 7.2e-143 511.1 383 68.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 9.8e-140 500.7 385 64.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.2e-139 499.6 379 68.3
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 4.9e-139 498.4 371 68.2
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 6.3e-139 498.0 384 65.9
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 8.3e-139 497.7 383 66.6
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 9.2e-138 494.2 385 65.2
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 7.8e-137 491.1 363 65.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.9e-136 489.2 365 66.6
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.9e-136 489.2 366 67.5
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 5.6e-135 485.0 383 65.0
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 5.6e-135 485.0 377 62.9
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.3e-135 484.6 361 64.8
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.1e-134 483.0 361 64.5
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 8.0e-134 481.1 383 64.2
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 8.0e-134 481.1 380 62.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.3e-133 479.6 385 62.1
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 4.0e-133 478.8 380 64.7
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.0e-133 478.8 379 64.6
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.4e-132 475.7 367 66.8
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.4e-132 475.7 367 66.8
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.4e-132 475.7 363 65.0
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 8.3e-131 471.1 373 64.9
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 2.4e-130 469.5 383 64.2
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 4.1e-130 468.8 370 65.1
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.2e-129 467.2 352 63.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.0e-129 466.5 377 62.9
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.7e-129 466.1 367 65.9
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 4.6e-129 465.3 405 60.5
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 4.6e-129 465.3 443 57.6
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.0e-128 464.2 375 63.7
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.0e-128 464.2 373 63.3
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.7e-128 463.4 363 65.6
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 5.0e-128 461.8 365 64.7
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 6.6e-128 461.5 367 65.1
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 6.6e-128 461.5 369 64.5
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.1e-127 460.7 367 64.3
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.1e-127 460.7 367 64.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.5e-127 459.5 388 61.1
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.5e-127 459.5 367 64.3
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 9.5e-127 457.6 323 71.5
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 9.5e-127 457.6 368 64.9
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.8e-126 456.1 377 64.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 8.0e-126 454.5 373 61.1
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.1e-125 454.1 376 61.4
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-125 453.8 282 80.1
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 1.2e-124 450.7 373 60.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 9.8e-124 447.6 368 63.3
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 4.9e-123 445.3 377 60.2
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 8.3e-123 444.5 374 63.4
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 3.5e-121 439.1 379 58.8
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 4.6e-121 438.7 375 58.4
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 6.0e-121 438.3 382 60.2
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 3.9e-120 435.6 373 60.1
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 5.1e-120 435.3 377 58.1
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.5e-119 433.7 379 57.8
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.5e-119 433.7 375 58.9
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.9e-119 433.3 342 64.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.3e-119 432.2 377 58.1
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 9.5e-119 431.0 374 58.6
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.2e-118 430.6 366 59.3
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 2.1e-118 429.9 370 58.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 4.7e-118 428.7 344 63.1
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 6.2e-118 428.3 390 59.7
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 6.2e-118 428.3 379 58.8
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.4e-117 427.2 370 59.5
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 6.8e-117 424.9 368 59.8
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 2.6e-116 422.9 370 59.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 7.5e-116 421.4 342 62.9
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.3e-115 420.6 381 58.5
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 6.4e-115 418.3 370 58.1
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.9e-114 416.8 370 58.6
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 9.2e-114 414.5 370 58.4
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 9.2e-114 414.5 293 68.6
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.5e-113 412.5 370 58.1
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.6e-112 408.3 361 58.2
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.9e-111 406.8 337 62.3
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 2.6e-108 396.4 378 55.0
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 5.8e-108 395.2 322 63.0
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.9e-106 390.2 291 66.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 3.5e-105 386.0 357 57.7
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 3.4e-100 369.4 289 62.6
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.7e-99 367.1 342 57.0
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.7e-99 367.1 372 55.1
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.2e-98 362.5 345 56.5
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 5.4e-98 362.1 263 66.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.1e-97 360.1 402 49.3
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.3e-96 357.5 237 73.0
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.9e-96 355.9 254 73.6
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.3e-95 352.8 313 60.4
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.6e-94 350.5 234 70.1
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 4.2e-90 335.9 318 54.1
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.2e-89 334.3 368 49.2
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.6e-89 334.0 282 58.5
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.5e-89 332.8 182 86.3
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.1e-85 321.2 327 51.4
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 6.4e-83 312.0 344 51.7
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.1e-81 307.0 297 56.6
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.1e-77 294.7 171 80.7
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 2.9e-75 286.6 284 53.2
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.8e-56 224.2 196 60.7
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.2e-52 211.5 326 38.7
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 9.1e-45 185.3 315 40.0
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.2e-44 184.9 137 62.0
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.9e-42 177.6 261 42.1
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-38 164.9 192 46.9
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.8e-38 163.7 187 47.6
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.4e-37 159.5 163 50.9
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 2.6e-23 114.0 71 76.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 7.3e-18 95.9 117 47.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.4e-13 80.9 51 72.5
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.5e-10 70.9 55 60.0
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.5e-10 68.9 81 46.9


User provided reference genes

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