Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 3.0e-84 315.1 155 100.0
Rhsim02G0256700 Rhododendron simsii HOM05D021265 ORTHO05D338454 3.2e-17 92.4 54 77.8
Rhsim06G0079000 Rhododendron simsii HOM05D021265 ORTHO05D338543 8.5e-10 67.8 47 74.5
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 6.1e-08 61.6 67 49.3
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 6.1e-08 61.6 55 58.2
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 2.3e-07 59.7 65 50.8
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.3e-07 59.7 55 58.2
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 3.9e-07 58.9 50 60.0
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 5.1e-07 58.5 56 53.6
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 5.1e-07 58.5 56 55.4
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 6.7e-07 58.2 43 65.1
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 6.7e-07 58.2 49 59.2
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 8.8e-07 57.8 49 57.1
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.5e-06 57.0 49 57.1
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 2.0e-06 56.6 49 57.1
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 2.0e-06 56.6 49 55.1
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 2.0e-06 56.6 56 51.8
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 2.0e-06 56.6 56 51.8
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 2.0e-06 56.6 49 55.1
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 2.5e-06 56.2 65 46.2
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 2.5e-06 56.2 49 57.1
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.5e-06 56.2 50 56.0
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 2.5e-06 56.2 49 59.2
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 3.3e-06 55.8 46 58.7
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 5.7e-06 55.1 49 55.1
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 5.7e-06 55.1 54 51.9
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 7.4e-06 54.7 49 55.1
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 7.4e-06 54.7 49 55.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 9.7e-06 54.3 43 60.5


User provided reference genes

Program Settings