Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.0e-72 274.2 129 100.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 6.1e-46 187.6 142 69.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.0e-45 186.8 128 71.9
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 1.0e-45 186.8 128 71.9
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 9.7e-44 180.3 131 70.2
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.4e-42 175.6 131 67.9
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 3.1e-42 175.3 127 69.3
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 2.7e-41 172.2 128 67.2
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.9e-41 171.0 122 69.7
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 1.3e-40 169.9 127 66.9
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 6.5e-40 167.5 127 66.1
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 8.5e-40 167.2 127 65.4
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.5e-39 166.4 127 65.4
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.5e-39 165.6 128 64.1
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 7.2e-39 164.1 128 63.3
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 2.1e-38 162.5 127 63.8
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 2.1e-38 162.5 131 63.4
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 3.6e-38 161.8 125 64.8
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 4.7e-38 161.4 131 62.6
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 4.7e-38 161.4 128 62.5
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 4.7e-38 161.4 117 65.8
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 6.1e-38 161.0 116 70.7
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 6.1e-38 161.0 128 62.5
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.8e-37 159.5 131 61.8
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.0e-37 158.3 130 61.5
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 4.0e-37 158.3 128 60.2
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.8e-37 157.1 150 56.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.2e-36 156.8 131 59.5
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.2e-36 156.8 116 69.8
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.2e-36 156.8 116 69.8
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.0e-36 156.0 130 60.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 2.0e-36 156.0 127 60.6
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 2.0e-36 156.0 116 68.1
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 3.4e-36 155.2 130 57.7
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 3.4e-36 155.2 130 60.8
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 4.4e-36 154.8 128 59.4
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 4.4e-36 154.8 129 60.5
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 5.7e-36 154.5 130 60.8
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.7e-36 154.5 128 60.9
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.7e-36 154.5 130 60.8
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 5.7e-36 154.5 116 66.4
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 7.5e-36 154.1 128 59.4
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 9.8e-36 153.7 130 60.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 2.2e-35 152.5 130 57.7
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 2.2e-35 152.5 116 64.7
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 2.8e-35 152.1 128 57.8
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.8e-35 152.1 115 66.1
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 3.7e-35 151.8 122 60.7
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 3.7e-35 151.8 128 60.9
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 4.8e-35 151.4 116 65.5
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 4.8e-35 151.4 130 57.7
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 6.3e-35 151.0 130 57.7
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 6.3e-35 151.0 128 57.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 6.3e-35 151.0 128 59.4
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.1e-34 150.2 128 57.8
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.8e-34 149.4 128 57.8
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.8e-34 149.4 128 59.4
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.8e-34 149.4 116 63.8
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 2.4e-34 149.1 114 64.9
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.1e-34 148.7 111 66.7
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 3.1e-34 148.7 130 56.9
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 4.1e-34 148.3 128 57.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 5.4e-34 147.9 116 63.8
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 7.0e-34 147.5 128 55.5
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 7.0e-34 147.5 128 56.2
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 7.0e-34 147.5 115 60.9
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 9.1e-34 147.1 130 56.9
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 2.0e-33 146.0 128 55.5
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 2.7e-33 145.6 114 60.5
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 3.5e-33 145.2 128 56.2
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 4.5e-33 144.8 114 64.9
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 4.5e-33 144.8 131 57.3
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 7.7e-33 144.1 126 55.6
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 7.7e-33 144.1 124 55.6
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.3e-32 143.3 120 57.5
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.3e-32 143.3 116 61.2
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 1.7e-32 142.9 115 61.7
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 1.7e-32 142.9 114 59.6
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 2.3e-32 142.5 116 59.5
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.3e-32 142.5 102 67.6
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 5.0e-32 141.4 116 62.9
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.1e-31 140.2 116 62.1
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.5e-31 139.8 123 58.5
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.9e-31 139.4 122 56.6
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 3.2e-31 138.7 122 54.9
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 3.2e-31 138.7 122 54.9
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 3.2e-31 138.7 122 54.9
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 7.2e-31 137.5 121 58.7
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 7.2e-31 137.5 122 57.4
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.1e-30 136.0 123 55.3
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 2.1e-30 136.0 102 65.7
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 1.4e-29 133.3 115 58.3
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.4e-29 133.3 118 57.6
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.4e-29 133.3 116 61.2
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 1.8e-29 132.9 112 59.8
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.3e-29 132.5 116 56.9
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 1.2e-28 130.2 116 56.9
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.5e-28 129.8 116 56.9
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 2.0e-28 129.4 116 56.9
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 4.4e-28 128.3 105 60.0
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 5.7e-28 127.9 116 55.2
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 5.7e-28 127.9 120 53.3
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.8e-27 125.6 116 53.4
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.7e-27 125.2 116 53.4
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.1e-26 123.6 111 54.1
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.4e-26 123.2 116 55.2
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.1e-26 122.1 103 55.3
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 7.0e-26 120.9 97 62.9
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 7.0e-26 120.9 111 52.3
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.6e-25 119.8 75 70.7
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.6e-25 119.8 116 51.7
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 4.5e-25 118.2 101 59.4
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.0e-24 117.1 111 55.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 2.3e-24 115.9 115 51.3
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.6e-24 114.4 103 53.4
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.1e-23 113.6 104 54.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 2.1e-22 109.4 79 59.5
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 1.8e-21 106.3 101 51.5
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 7.5e-20 100.9 74 56.8
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 6.4e-19 97.8 119 45.4
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 3.5e-17 92.0 78 52.6
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.7e-16 89.7 85 54.1
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 6.6e-16 87.8 122 41.8
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 1.9e-15 86.3 105 44.8
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.4e-13 80.1 56 64.3
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.3e-13 79.3 67 55.2
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 4.4e-12 75.1 76 47.4
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.9e-10 69.7 83 47.0
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 9.2e-10 67.4 65 49.2
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 8.1e-06 54.3 90 35.6


User provided reference genes

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