Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0246700 Rhododendron simsii HOM05D002931 ORTHO05D003273 6.3e-141 504.2 274 100.0
Rhsim03G0246800 Rhododendron simsii HOM05D002931 ORTHO05D003273 1.3e-82 310.5 317 64.7
Rhsim03G0246600 Rhododendron simsii HOM05D002931 ORTHO05D003273 6.6e-66 255.0 395 44.8
vmacro06178 Vaccinium macrocarpon HOM05D002931 ORTHO05D003273 1.1e-39 167.9 256 44.5
CSS0026205 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 5.3e-39 165.6 373 36.2
Actinidia26402 Actinidia chinensis HOM05D002931 ORTHO05D003273 1.3e-37 161.0 386 36.0
Actinidia07433 Actinidia chinensis HOM05D002931 ORTHO05D003273 1.0e-34 151.4 390 34.9
CSS0021369 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 3.8e-29 132.9 381 33.3
CSS0048152 Camellia sinensis var. sinensis HOM05D002931 ORTHO05D003273 1.6e-27 127.5 368 32.6
Dinv36544 Davidia involucrata HOM05D002931 ORTHO05D003273 8.7e-26 121.7 272 36.0
Dinv41530 Davidia involucrata HOM05D002931 ORTHO05D003273 8.7e-26 121.7 273 37.4
Ciclev10007946m.g Citrus clementina HOM05D002931 ORTHO05D003273 1.2e-22 111.3 276 33.0
Rhsim12G0182000 Rhododendron simsii HOM05D002931 ORTHO05D003273 1.3e-21 107.8 63 92.1
TAR636G1764 Trochodendron aralioides HOM05D002931 ORTHO05D003273 3.9e-18 96.3 278 31.7
Cfa003349 Carpinus fangiana HOM05D002931 ORTHO05D003273 5.7e-17 92.4 256 31.6
TWI34G0601 Tripterygium wilfordii HOM05D002931 ORTHO05D003273 2.4e-15 87.0 295 29.5
Haze_25612 Corylus avellana HOM05D002931 ORTHO05D001597 3.4e-14 83.2 256 30.9
GSVIVG01015505001 Vitis vinifera HOM05D002931 ORTHO05D003273 2.9e-13 80.1 246 30.1
TAR625G1122 Trochodendron aralioides HOM05D002931 ORTHO05D003273 5.0e-13 79.3 280 31.1
Nn8g39392 Nelumbo nucifera HOM05D002931 ORTHO05D003273 3.2e-12 76.6 295 28.5
QL02p087842 Quercus lobata HOM05D002931 ORTHO05D003273 9.4e-12 75.1 273 28.2
Atru.chr7.1207 Acer truncatum HOM05D002931 ORTHO05D003273 7.9e-11 72.0 294 29.3
CiPaw.03G242100 Carya illinoinensis HOM05D002931 ORTHO05D003273 1.0e-10 71.6 252 29.0
Prupe.7G239900 Prunus persica HOM05D002931 ORTHO05D003273 1.0e-10 71.6 258 29.5
Manes.06G049800 Manihot esculenta HOM05D002931 ORTHO05D003273 7.4e-09 65.5 278 27.7
MBI04_g07629_MAGBIO Magnolia biondii HOM05D002931 ORTHO05D003273 4.8e-08 62.8 291 27.5
Duzib150G1215 Durio zibethinus HOM05D002931 ORTHO05D003273 1.8e-07 60.8 280 26.8
Glyma.05G008000 Glycine max HOM05D002931 ORTHO05D003273 2.6e-06 57.0 278 24.1


User provided reference genes

Program Settings