Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 2.5e-292 1008.1 509 100.0
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 1.1e-117 427.9 665 46.9
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 4.7e-73 279.6 548 42.7
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.6e-63 247.3 228 64.9
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 3.3e-63 246.9 225 64.0
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 8.2e-62 242.3 223 60.5
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 2.4e-61 240.7 225 62.7
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 4.1e-61 240.0 235 59.6
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 4.5e-60 236.5 225 61.8
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.0e-59 235.3 226 63.3
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 2.9e-59 233.8 228 61.8
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 5.0e-59 233.0 225 61.3
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 7.2e-58 229.2 210 65.2
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 7.2e-58 229.2 225 58.2
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 4.7e-57 226.5 216 62.0
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 6.1e-57 226.1 226 60.2
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 8.0e-57 225.7 225 61.3
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 2.3e-56 224.2 222 58.6
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 3.4e-55 220.3 229 59.0
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 4.4e-55 219.9 225 60.4
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 7.5e-55 219.2 223 60.1
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 1.3e-54 218.4 229 57.2
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 3.7e-54 216.9 225 59.1
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 4.8e-54 216.5 226 57.5
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 1.8e-53 214.5 222 56.3
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 2.4e-53 214.2 225 59.6
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 3.1e-53 213.8 225 58.7
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 3.1e-53 213.8 225 58.2
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 9.1e-53 212.2 224 58.9
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.6e-52 211.5 172 70.3
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 4.5e-52 209.9 225 57.8
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 7.7e-52 209.1 222 55.4
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 7.7e-52 209.1 516 39.3
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.3e-51 208.4 226 58.8
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 2.2e-51 207.6 228 57.0
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 3.8e-51 206.8 215 59.5
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 3.8e-51 206.8 222 56.3
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 6.5e-51 206.1 225 56.9
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 3.2e-50 203.8 215 59.5
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 1.6e-49 201.4 227 56.4
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.6e-49 201.4 222 54.5
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 2.7e-49 200.7 226 55.3
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 4.7e-49 199.9 224 55.8
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.8e-48 198.0 225 56.4
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 1.5e-47 194.9 210 57.6
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 2.6e-47 194.1 219 56.6
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 3.4e-47 193.7 234 56.8
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 3.4e-47 193.7 223 52.9
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 4.4e-47 193.4 224 53.6
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 5.7e-47 193.0 514 36.6
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 9.8e-47 192.2 214 56.5
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 2.2e-46 191.0 227 54.6
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 6.3e-46 189.5 227 56.8
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 8.3e-46 189.1 215 55.8
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 2.4e-45 187.6 227 54.6
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 1.6e-44 184.9 227 54.2
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 1.6e-44 184.9 234 52.6
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 2.7e-44 184.1 557 35.9
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 3.5e-44 183.7 234 52.6
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 7.7e-44 182.6 217 53.5
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 2.3e-43 181.0 230 50.4
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.3e-43 181.0 223 51.6
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 3.8e-43 180.3 224 51.3
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.1e-42 178.7 226 55.3
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 5.5e-42 176.4 229 51.1
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 9.5e-42 175.6 233 55.4
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 5.2e-40 169.9 222 53.2
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 5.2e-40 169.9 215 53.0
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 8.9e-40 169.1 229 51.1
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 4.4e-39 166.8 263 45.6
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 1.1e-37 162.2 227 52.0
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 1.1e-37 162.2 196 54.6
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 4.3e-34 150.2 239 46.0
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.8e-33 147.5 226 47.8
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 4.7e-33 146.7 232 47.8
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 6.1e-33 146.4 206 48.5
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 2.3e-32 144.4 208 49.0
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 4.0e-32 143.7 207 47.3
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 7.5e-31 139.4 225 43.6
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 2.2e-30 137.9 207 46.4
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 2.2e-30 137.9 207 46.4
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 3.7e-30 137.1 295 38.0
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 8.3e-30 136.0 261 40.2
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 3.2e-29 134.0 237 44.3
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 1.2e-28 132.1 227 48.0
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.6e-28 131.7 241 44.0
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 3.5e-28 130.6 290 37.6
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 2.3e-27 127.9 230 43.0
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 3.9e-27 127.1 216 43.5
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 4.4e-23 113.6 233 40.3
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.2e-22 111.3 221 43.0
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 1.0e-19 102.4 233 42.5
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 1.9e-18 98.2 230 38.7
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 2.5e-18 97.8 247 40.1
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 9.5e-18 95.9 226 40.7
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 8.1e-17 92.8 205 41.0
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.8e-16 91.7 241 37.3
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 1.2e-15 89.0 230 40.0
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 1.5e-15 88.6 245 39.2
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 3.4e-15 87.4 217 39.2
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 2.9e-14 84.3 244 36.9
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 4.9e-14 83.6 236 34.7
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 4.9e-14 83.6 216 39.4
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 8.3e-14 82.8 389 26.7
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 1.4e-13 82.0 240 36.2
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 1.4e-13 82.0 231 38.1
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.4e-13 82.0 214 38.3
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 1.9e-13 81.6 270 34.4
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 5.4e-13 80.1 138 43.5
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 9.2e-13 79.3 231 34.6
Lsat_1_v5_gn_5_102961 Lactuca sativa HOM05D005514 ORTHO05D006563 2.7e-12 77.8 58 72.4
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 6.0e-12 76.6 222 36.0
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 6.0e-12 76.6 222 36.0
Cc06_g09940 Coffea canephora HOM05D005514 ORTHO05D006563 1.5e-10 72.0 74 58.1
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 1.9e-10 71.6 204 36.3
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 9.6e-10 69.3 204 33.3
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.6e-09 68.6 210 33.3
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 8.1e-09 66.2 239 33.9
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 8.1e-09 66.2 199 34.2
MD15G1181500 Malus domestica HOM05D005514 ORTHO05D006563 8.9e-08 62.8 64 59.4
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 2.0e-07 61.6 228 32.9
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 4.4e-07 60.5 68 54.4
Oeu064594.1 Olea europaea HOM05D005514 ORTHO05D006563 9.9e-07 59.3 66 62.1
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 1.7e-06 58.5 233 32.2
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 1.7e-06 58.5 214 32.7
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 2.9e-06 57.8 223 31.8


User provided reference genes

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