Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 2.5e-103 378.6 174 100.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.2e-50 201.1 96 92.7
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 7.2e-50 201.1 96 92.7
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.1e-47 193.7 95 87.4
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 9.7e-47 190.7 95 86.3
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.3e-46 190.3 94 83.0
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 2.8e-46 189.1 94 83.0
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 3.7e-46 188.7 95 86.3
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 3.7e-46 188.7 95 86.3
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 4.8e-46 188.3 101 80.2
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 1.1e-45 187.2 92 85.9
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 1.1e-45 187.2 92 85.9
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 1.1e-45 187.2 92 85.9
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.4e-45 186.8 93 84.9
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.8e-45 186.4 94 81.9
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.1e-45 185.7 95 83.2
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 3.1e-45 185.7 95 83.2
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.3e-45 184.9 95 83.2
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 5.3e-45 184.9 95 82.1
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 9.1e-45 184.1 95 83.2
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.2e-44 183.7 92 83.7
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.2e-44 183.7 95 83.2
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 1.2e-44 183.7 93 82.8
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 2.0e-44 183.0 93 83.9
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 7.7e-44 181.0 95 77.9
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.0e-43 180.6 95 78.9
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.0e-43 180.6 95 78.9
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.3e-43 180.3 93 79.6
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.7e-43 179.9 100 76.0
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.7e-43 179.9 93 81.7
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.7e-43 179.9 96 77.1
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 2.2e-43 179.5 93 78.5
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 2.9e-43 179.1 95 77.9
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.9e-43 179.1 93 80.6
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.8e-43 178.7 93 76.3
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.8e-43 178.7 93 76.3
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.8e-43 178.7 96 76.0
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.8e-43 178.7 96 76.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 3.8e-43 178.7 93 78.5
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 3.8e-43 178.7 96 76.0
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 3.8e-43 178.7 96 76.0
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 5.0e-43 178.3 95 81.1
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 5.0e-43 178.3 92 79.3
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 6.5e-43 177.9 95 78.9
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.5e-43 177.6 100 74.0
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 8.5e-43 177.6 93 78.5
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 8.5e-43 177.6 91 81.3
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 8.5e-43 177.6 93 79.6
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 8.5e-43 177.6 95 77.9
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 1.1e-42 177.2 95 81.1
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.5e-42 176.8 93 79.6
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 1.5e-42 176.8 94 78.7
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.9e-42 176.4 96 75.0
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.9e-42 176.4 93 80.6
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 2.5e-42 176.0 96 72.9
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.2e-42 175.6 95 78.9
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.2e-42 175.6 95 78.9
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 3.2e-42 175.6 93 77.4
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 4.2e-42 175.3 89 80.9
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 4.2e-42 175.3 95 77.9
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 4.2e-42 175.3 95 78.9
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.5e-42 174.9 94 73.4
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 7.2e-42 174.5 100 73.0
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 7.2e-42 174.5 94 75.5
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 9.4e-42 174.1 91 79.1
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 9.4e-42 174.1 94 76.6
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.2e-41 173.7 96 75.0
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 1.2e-41 173.7 93 76.3
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 1.6e-41 173.3 94 76.6
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-41 173.3 94 76.6
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.6e-41 173.3 94 77.7
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.6e-41 173.3 95 75.8
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 2.1e-41 172.9 93 77.4
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 2.1e-41 172.9 93 75.3
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 2.1e-41 172.9 92 77.2
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 2.1e-41 172.9 100 71.0
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 2.1e-41 172.9 95 78.9
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 3.6e-41 172.2 95 78.9
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 3.6e-41 172.2 95 77.9
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 4.7e-41 171.8 92 76.1
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 6.1e-41 171.4 89 79.8
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 6.1e-41 171.4 93 76.3
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 1.4e-40 170.2 91 76.9
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 1.4e-40 170.2 91 76.9
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 1.8e-40 169.9 94 72.3
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.8e-40 169.9 93 72.0
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.8e-40 169.9 94 74.5
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 1.8e-40 169.9 100 70.0
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 5.2e-40 168.3 99 70.7
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.5e-39 166.8 115 66.1
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.0e-39 166.4 120 62.5
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.0e-39 166.4 95 75.8
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 2.6e-39 166.0 86 82.6
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.4e-39 165.2 91 75.8
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.4e-39 165.2 91 75.8
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 5.7e-39 164.9 93 74.2
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 5.7e-39 164.9 99 69.7
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 9.7e-39 164.1 94 73.4
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.7e-39 164.1 95 73.7
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 2.2e-38 162.9 95 73.7
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 6.3e-38 161.4 96 72.9
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 1.4e-37 160.2 105 64.8
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.8e-37 159.8 95 72.6
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.4e-37 159.5 103 67.0
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 7.0e-37 157.9 93 71.0
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 2.7e-36 156.0 91 73.6
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 2.7e-36 156.0 78 80.8
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.2e-35 152.9 84 73.8
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.5e-35 151.0 107 62.6
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 1.5e-34 150.2 94 60.6
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 2.5e-34 149.4 94 62.8
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 3.2e-34 149.1 94 62.8
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 4.2e-34 148.7 94 62.8
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 5.5e-34 148.3 92 63.0
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 5.5e-34 148.3 92 63.0
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 5.5e-34 148.3 92 63.0
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.6e-33 146.7 92 62.0
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.6e-33 146.7 92 62.0
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.6e-33 146.7 92 62.0
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.6e-33 146.7 92 62.0
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.6e-33 146.7 92 62.0
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 2.7e-33 146.0 92 63.0
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.6e-33 145.6 92 64.1
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.8e-32 141.4 78 78.2
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.0e-31 139.8 80 76.2
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.7e-30 135.6 74 77.0
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.1e-29 134.0 93 62.4
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 7.7e-28 127.9 72 72.2
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 5.0e-27 125.2 63 77.8
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 9.5e-26 120.9 71 77.5
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.6e-25 120.2 209 33.0
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 2.0e-23 113.2 61 82.0
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 3.7e-22 109.0 61 75.4
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.4e-21 106.3 74 63.5
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 8.0e-17 91.3 75 52.0
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 5.2e-16 88.6 83 45.8
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.1e-13 80.9 61 59.0
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 5.0e-11 72.0 40 72.5
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 6.8e-08 61.6 57 43.9


User provided reference genes

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