Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 4.5e-311 1070.5 546 100.0
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 1.2e-239 833.2 563 79.0
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.1e-181 640.6 553 64.9
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.3e-179 632.9 557 64.3
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 2.2e-177 626.3 562 63.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 7.0e-168 594.7 569 61.0
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 3.6e-156 555.8 564 56.7
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 2.6e-154 549.7 577 57.4
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 7.0e-152 541.6 564 55.5
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 1.6e-151 540.4 556 56.8
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 4.6e-151 538.9 562 55.9
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 6.0e-151 538.5 562 56.2
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 8.6e-150 534.6 562 55.9
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 4.3e-149 532.3 545 56.9
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 4.3e-149 532.3 550 55.5
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 8.1e-148 528.1 567 55.7
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 2.3e-147 526.6 538 56.5
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 3.1e-147 526.2 556 55.6
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 1.5e-146 523.9 536 56.0
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.5e-146 523.9 573 53.9
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 5.8e-146 521.9 550 55.3
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 3.7e-145 519.2 551 55.5
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 6.4e-145 518.5 555 52.6
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 5.4e-144 515.4 570 53.5
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 7.1e-144 515.0 513 57.9
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 9.2e-144 514.6 532 57.0
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.6e-143 513.8 470 61.1
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 6.0e-143 511.9 545 55.6
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 3.9e-142 509.2 567 51.3
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 3.9e-142 509.2 550 54.0
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 6.6e-142 508.4 451 62.3
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 8.6e-142 508.1 470 60.6
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 1.9e-141 506.9 449 61.9
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 1.9e-141 506.9 551 53.9
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 3.3e-141 506.1 566 52.5
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 3.3e-141 506.1 552 52.7
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 3.3e-141 506.1 451 61.9
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 4.3e-141 505.8 451 61.9
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 9.5e-141 504.6 528 55.1
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 6.2e-140 501.9 553 52.4
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 6.8e-139 498.4 480 59.2
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.5e-138 497.3 571 51.7
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 1.5e-138 497.3 622 50.0
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.6e-138 496.5 452 60.0
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 3.4e-138 496.1 566 51.6
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 2.2e-137 493.4 564 52.7
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 4.9e-137 492.3 479 58.7
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 1.4e-136 490.7 425 60.7
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 3.2e-136 489.6 548 50.7
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 9.2e-136 488.0 567 50.6
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.2e-135 487.6 548 50.5
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.1e-135 486.9 438 59.6
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 2.1e-135 486.9 531 52.5
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 4.6e-135 485.7 544 53.1
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.3e-134 484.2 533 53.7
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 2.3e-134 483.4 533 52.9
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.0e-134 483.0 537 53.4
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.0e-134 483.0 529 51.4
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 8.6e-134 481.5 540 53.5
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 1.5e-133 480.7 541 53.6
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 1.9e-133 480.3 548 52.6
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 1.9e-133 480.3 541 52.3
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 2.8e-132 476.5 540 53.0
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 3.6e-132 476.1 532 52.4
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 3.6e-132 476.1 536 53.0
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 9.0e-131 471.5 477 55.8
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 2.6e-130 469.9 550 52.5
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 9.9e-130 468.0 449 57.5
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 1.7e-129 467.2 556 52.2
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 1.7e-129 467.2 539 51.8
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.2e-129 466.8 526 52.9
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 2.9e-129 466.5 539 51.6
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 4.9e-129 465.7 537 51.8
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.9e-129 465.7 524 53.1
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 6.4e-129 465.3 539 51.4
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 1.1e-128 464.5 576 50.2
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.4e-128 463.4 524 52.7
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 2.4e-128 463.4 476 55.0
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.2e-128 463.0 524 52.9
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 7.1e-128 461.8 524 52.1
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 9.3e-128 461.5 561 49.4
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.6e-127 460.7 539 51.2
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.6e-127 460.7 539 51.2
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 2.1e-127 460.3 561 49.4
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.7e-127 459.9 525 53.1
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 2.7e-127 459.9 544 50.6
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 1.0e-126 458.0 545 51.9
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 2.3e-126 456.8 417 58.0
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 5.1e-126 455.7 566 47.7
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 6.6e-126 455.3 464 55.2
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 8.1e-124 448.4 466 54.5
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.3e-121 441.0 470 53.6
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 8.4e-121 438.3 581 48.2
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.4e-120 437.6 541 48.8
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 1.9e-120 437.2 695 43.3
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 1.9e-120 437.2 561 46.7
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 3.2e-120 436.4 540 50.6
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 3.9e-118 429.5 415 56.1
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 6.2e-116 422.2 538 48.7
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 1.7e-113 414.1 394 59.1
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 1.6e-111 407.5 504 48.6
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 6.0e-111 405.6 335 64.5
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 7.4e-109 398.7 513 47.2
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.3e-108 397.9 528 45.1
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 6.0e-103 379.0 366 58.5
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 6.7e-102 375.6 416 51.4
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 3.7e-100 369.8 472 49.2
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 3.0e-94 350.1 320 59.4
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 9.4e-80 302.0 579 38.3
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 3.6e-79 300.1 437 44.9
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.9e-72 277.7 370 45.1
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 1.4e-70 271.6 287 50.9
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 1.2e-69 268.5 260 57.3
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 1.5e-69 268.1 473 41.0
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 7.0e-67 259.2 243 58.8
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 8.3e-60 235.7 504 32.5
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 2.5e-56 224.2 289 40.5
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 8.6e-49 199.1 523 30.8
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.3e-46 191.0 294 43.5
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.2e-31 139.8 95 71.6
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 3.2e-27 127.5 205 34.1
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 3.9e-25 120.6 124 55.6
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 9.9e-21 105.9 62 74.2
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.7e-18 97.8 250 32.4
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 2.3e-17 94.7 154 47.4
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 2.3e-17 94.7 168 39.3
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 4.7e-15 87.0 80 57.5
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 5.8e-13 80.1 73 52.1
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 9.3e-11 72.8 71 52.1


User provided reference genes

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