Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 7.3e-110 400.6 205 100.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.0e-50 204.1 135 78.5
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.4e-49 200.3 173 67.6
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.4e-49 200.3 183 62.8
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.4e-49 200.3 183 62.8
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 6.1e-48 194.9 175 65.7
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.9e-48 194.5 176 64.8
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.8e-47 193.4 176 65.9
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.1e-46 190.7 177 62.7
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 3.4e-43 179.1 168 66.7
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.0e-39 167.5 152 65.8
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 4.4e-38 162.2 171 59.6
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 7.2e-33 144.8 171 50.9
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 7.2e-33 144.8 167 51.5
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 9.4e-33 144.4 172 50.6
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.2e-32 144.1 168 53.0
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 8.2e-29 131.3 169 47.3
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 2.4e-28 129.8 170 47.6
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.1e-28 129.0 171 48.5
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.1e-28 129.0 180 47.8
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 1.2e-27 127.5 165 47.3
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 3.5e-27 125.9 181 46.4
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.3e-26 124.0 176 46.6
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 3.8e-26 122.5 210 42.9
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 5.0e-26 122.1 182 46.7
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.1e-25 120.9 170 45.9
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 1.5e-25 120.6 181 44.2
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.5e-25 120.6 172 47.1
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.5e-25 119.8 178 50.0
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 4.2e-25 119.0 212 40.1
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 4.2e-25 119.0 170 45.9
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 9.4e-25 117.9 199 42.2
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 1.2e-24 117.5 172 43.0
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.6e-24 115.9 170 45.3
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 4.7e-24 115.5 172 48.8
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 6.1e-24 115.2 167 50.9
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 6.1e-24 115.2 167 50.9
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 8.0e-24 114.8 174 45.4
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 3.0e-23 112.8 185 44.3
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 4.0e-23 112.5 201 39.8
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 2.8e-21 106.3 183 42.1
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 6.3e-21 105.1 163 45.4
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 1.2e-19 100.9 191 44.0
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.6e-19 100.5 170 43.5
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 2.0e-19 100.1 174 41.4
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 2.7e-19 99.8 211 37.0
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 4.5e-19 99.0 169 44.4
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.5e-19 99.0 157 45.2
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.7e-18 97.1 169 43.8
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.3e-18 96.7 181 40.9
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.9e-18 96.3 164 44.5
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 3.8e-18 95.9 167 41.3
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 1.5e-17 94.0 212 37.3
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.5e-17 93.2 171 37.4
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 2.5e-17 93.2 207 34.3
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 9.5e-17 91.3 169 37.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 3.0e-15 86.3 153 40.5
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 3.0e-15 86.3 155 40.6
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 5.2e-15 85.5 195 39.5
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.4e-14 82.8 123 48.0
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 7.5e-14 81.6 161 41.0
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 4.9e-13 79.0 220 32.3
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.1e-12 77.8 198 33.3
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.1e-12 77.8 203 34.0
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 1.4e-12 77.4 191 33.5
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.4e-12 76.6 165 35.8
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 2.7e-11 73.2 168 35.1
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 4.5e-11 72.4 168 34.5
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.0e-10 71.2 162 35.8
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 2.3e-10 70.1 180 33.9
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 2.9e-10 69.7 225 33.8
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 2.9e-10 69.7 167 31.7
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 3.8e-10 69.3 156 36.5
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 3.8e-10 69.3 171 34.5
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 6.6e-10 68.6 206 33.5
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 8.6e-10 68.2 212 33.0
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 8.6e-10 68.2 177 37.3
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 1.9e-09 67.0 168 36.9
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 2.5e-09 66.6 150 35.3
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 4.3e-09 65.9 155 33.5
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 4.3e-09 65.9 216 31.5
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 5.6e-09 65.5 173 35.8
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 7.3e-09 65.1 155 33.5
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 7.3e-09 65.1 180 30.6
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 7.3e-09 65.1 157 35.0
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 1.2e-08 64.3 194 32.0
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.6e-08 63.9 194 31.4
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 1.6e-08 63.9 182 30.2
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 2.8e-08 63.2 173 35.3
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 2.8e-08 63.2 164 31.7
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.7e-08 62.4 156 32.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 6.1e-08 62.0 171 33.9
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 6.1e-08 62.0 214 33.6
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.4e-07 60.8 156 31.4
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.4e-07 60.8 177 35.0
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 1.4e-07 60.8 145 33.8
GSVIVG01034561001 Vitis vinifera HOM05D006494 ORTHO05D007787 1.4e-07 60.8 99 41.4
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 4.0e-07 59.3 131 35.1
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 6.8e-07 58.5 179 34.6
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 1.2e-06 57.8 102 38.2
Hund04779 Selenicereus undatus HOM05D014004 ORTHO05D015823 7.5e-06 55.1 59 54.2


User provided reference genes

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