Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim03G0179400 Rhododendron simsii HOM05D019148 ORTHO05D019092 8.7e-44 179.9 88 100.0
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 6.7e-12 73.9 90 48.9
Dinv35204 Davidia involucrata HOM05D061900 ORTHO05D019092 6.3e-10 67.4 66 50.0
Lsat_1_v5_gn_0_29740 Lactuca sativa HOM05D019148 ORTHO05D019092 6.9e-09 63.9 89 42.7
Thecc.03G175000 Theobroma cacao HOM05D012645 ORTHO05D011500 2.0e-08 62.4 89 41.6
Manes.14G026900 Manihot esculenta HOM05D015019 ORTHO05D013840 2.6e-08 62.0 86 37.2
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 5.9e-08 60.8 88 37.5
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 7.7e-08 60.5 88 38.6
Potri.015G139966 Populus trichocarpa HOM05D010814 ORTHO05D011500 7.7e-08 60.5 88 39.8
Actinidia34100 Actinidia chinensis HOM05D003520 ORTHO05D003332 3.8e-07 58.2 55 52.7
Potri.012G138200 Populus trichocarpa HOM05D010814 ORTHO05D011500 3.8e-07 58.2 88 38.6
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 6.5e-07 57.4 80 42.5
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 6.5e-07 57.4 80 42.5
Thecc.03G175100 Theobroma cacao HOM05D015019 ORTHO05D013840 6.5e-07 57.4 88 39.8
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 1.9e-06 55.8 88 37.5
Lsat_1_v5_gn_2_131781 Lactuca sativa HOM05D019148 ORTHO05D019092 2.5e-06 55.5 79 40.5
Lsat_1_v5_gn_2_133720 Lactuca sativa HOM05D019148 ORTHO05D019092 2.5e-06 55.5 84 40.5
Prupe.2G292900 Prunus persica HOM05D016143 ORTHO05D020738 4.2e-06 54.7 92 39.1
Eucgr.D01882 Eucalyptus grandis HOM05D008852 ORTHO05D010731 5.5e-06 54.3 88 35.2
Lsat_1_v5_gn_2_133740 Lactuca sativa HOM05D019148 ORTHO05D019092 5.5e-06 54.3 79 38.0
SGA_v2.0_scaffold113G31750 Striga asiatica HOM05D019148 ORTHO05D402167 5.5e-06 54.3 62 48.4
Potri.003G124000 Populus trichocarpa HOM05D008852 ORTHO05D010731 7.2e-06 53.9 80 40.0
Prupe.5G095200 Prunus persica HOM05D008852 ORTHO05D010731 9.4e-06 53.5 89 39.3


User provided reference genes

Program Settings